RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 KBTBD11O94819 623 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 RPL23P62829 140 aaKnown RBP11.95□□□□□ -0.5
CDH1-209ENST00000566510 ARG2P78540 354 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 ATP1A1-AS1Q5TC04 95 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 CYP2G1PQ6ZSU1 146 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 TMEM147Q9BVK8 224 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 PITPNC1Q9UKF7 332 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 FZR1Q9UM11 496 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 CTXND1A0A1B0GTU2 59 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 PPP5D1E7EU14 171 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 PAGE4O60829 102 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 CD46P15529 392 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 MPV17P39210 176 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 RAB24Q969Q5 203 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 C5orf30Q96GV9 206 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 ELOVL1Q9BW60 279 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 SPRR3Q9UBC9 169 aa11.95□□□□□ -0.5
CDH1-209ENST00000566510 COX5AP20674 150 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 COL10A1Q03692 680 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 ACSF3Q4G176 576 aaPredicted RBP11.94□□□□□ -0.5
CDH1-209ENST00000566510 RNFT1Q5M7Z0 435 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 TMPRSS7Q7RTY8 843 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 PCGF1Q9BSM1 259 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 PARD6GQ9BYG4 376 aaPredicted RBP11.94□□□□□ -0.5
CDH1-209ENST00000566510 ACTR3CQ9C0K3 210 aaPredicted RBP11.94□□□□□ -0.5
CDH1-209ENST00000566510 TIMM9Q9Y5J7 89 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 OOEPA6NGQ2 149 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 C21orf140B9A014 251 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 SSTR5P35346 364 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 GPX4P36969 197 aaPredicted RBP11.94□□□□□ -0.5
CDH1-209ENST00000566510 TGFBR3Q03167 851 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 ZNF66Q6ZN08 573 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 NPCDR1Q9BY65 106 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 COL27A1Q8IZC6 1860 aaPredicted RBP11.94□□□□□ -0.5
CDH1-209ENST00000566510 AGFG2O95081 481 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 MBP02144 154 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 GZMHP20718 246 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 MPLP40238 635 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 Q3ZCU0 254 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 KLF14Q8TD94 323 aaPredicted RBP11.94□□□□□ -0.5
CDH1-209ENST00000566510 SRD5A3Q9H8P0 318 aa11.94□□□□□ -0.5
CDH1-209ENST00000566510 AURKAIP1Q9NWT8 199 aaPredicted RBP11.94□□□□□ -0.5
CDH1-209ENST00000566510 ZFHX4Q86UP3 3567 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 XKRY2A2RUG3 117 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 PHOX2AO14813 284 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 ST8SIA5O15466 376 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 PFN1P07737 140 aaKnown RBP11.93□□□□□ -0.5
CDH1-209ENST00000566510 IGHV1-2P23083 117 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 ATP6V1FQ16864 119 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 PRAMEF6Q5VXH4 476 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 Q6ZR03 302 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 CNEP1R1Q8N9A8 125 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 OR51G1Q8NGK1 321 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 PSG11Q9UQ72 335 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 HCFC1P51610 2035 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 TSTD3H0UI37 97 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 BRWD1-AS2P59051 145 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 UBE2G2P60604 165 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 SSX9Q7RTT3 188 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 TMEM183AQ8IXX5 376 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 ZBTB34Q8NCN2 500 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 TMEM37Q8WXS4 190 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 AGMATQ9BSE5 352 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 FAM234AQ9H0X4 552 aa11.93□□□□□ -0.5
CDH1-209ENST00000566510 TECTAO75443 2155 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 TMEM250H0YL14 139 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 CRYAAP02489 173 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 GYPAP02724 150 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 EGR1P18146 543 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 EDDM3AQ14507 147 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 P2RY6Q15077 328 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 CST9LP1Q5W188 147 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 MDS2Q8NDY4 140 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 MSL2Q9HCI7 577 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 MANBALQ9NQG1 85 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 LNP1A1A4G5 178 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 LINC00473A8K010 186 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 C1QTNF9BB2RNN3 333 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 CHRNA7P36544 502 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 FABP6P51161 128 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 ZNF766Q5HY98 468 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 COQ2Q96H96 371 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 METRNQ9UJH8 293 aa11.92□□□□□ -0.5
CDH1-209ENST00000566510 ICE1Q9Y2F5 2266 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.91□□□□□ -0.5
CDH1-209ENST00000566510 MARCH11A6NNE9 402 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 IQCF6A8MYZ5 107 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 C11orf94C9JXX5 98 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 MLNRO43193 412 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 TNFSF15O95150 251 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 CLDN14O95500 239 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 IGHV3-13P01766 116 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 IGHV3-7P01780 117 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 GCSAMLQ5JQS6 135 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 CENPVQ7Z7K6 275 aaPredicted RBP11.91□□□□□ -0.5
CDH1-209ENST00000566510 OR1P1Q8NH06 330 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 SDSLQ96GA7 329 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 C14orf144Q96I85 54 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 FER1L6-AS2Q96M78 137 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 CIB3Q96Q77 187 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms