RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 AKIRIN2Q53H80 203 aa12.12□□□□□ -0.47
CDH3-204ENST00000565453 ZNF562Q6V9R5 426 aa12.12□□□□□ -0.47
CDH3-204ENST00000565453 PPP1R27Q86WC6 154 aa12.12□□□□□ -0.47
CDH3-204ENST00000565453 C5orf30Q96GV9 206 aa12.12□□□□□ -0.47
CDH3-204ENST00000565453 CLCC1Q96S66 551 aa12.12□□□□□ -0.47
CDH3-204ENST00000565453 TSNAXQ99598 290 aaKnown RBP12.12□□□□□ -0.47
CDH3-204ENST00000565453 FAM103A1Q9BTL3 118 aaKnown RBP12.12□□□□□ -0.47
CDH3-204ENST00000565453 A3GALT2U3KPV4 340 aa12.12□□□□□ -0.47
CDH3-204ENST00000565453 M0R1X1 148 aa12.11□□□□□ -0.47
CDH3-204ENST00000565453 ARPC1BO15143 372 aaKnown RBP12.11□□□□□ -0.47
CDH3-204ENST00000565453 CA2P00918 260 aa12.11□□□□□ -0.47
CDH3-204ENST00000565453 IGLV2-23P01705 113 aa12.11□□□□□ -0.47
CDH3-204ENST00000565453 APOA2P02652 100 aa12.11□□□□□ -0.47
CDH3-204ENST00000565453 LGALS1P09382 135 aaKnown RBP12.11□□□□□ -0.47
CDH3-204ENST00000565453 RPS16P62249 146 aaKnown RBP12.11□□□□□ -0.47
CDH3-204ENST00000565453 SSBP2P81877 361 aaPredicted RBP12.11□□□□□ -0.47
CDH3-204ENST00000565453 TMEM267Q0VDI3 215 aaPredicted RBP12.11□□□□□ -0.47
CDH3-204ENST00000565453 UBE2UQ5VVX9 321 aa12.11□□□□□ -0.47
CDH3-204ENST00000565453 C22orf42Q6IC83 251 aa12.11□□□□□ -0.47
CDH3-204ENST00000565453 ABHD5Q8WTS1 349 aa12.11□□□□□ -0.47
CDH3-204ENST00000565453 MAFIPQ8WZ33 124 aa12.11□□□□□ -0.47
CDH3-204ENST00000565453 DCUN1D4Q92564 292 aa12.11□□□□□ -0.47
CDH3-204ENST00000565453 SDHAF2Q9NX18 166 aa12.11□□□□□ -0.47
CDH3-204ENST00000565453 ZNF230Q9UIE0 474 aaPredicted RBP12.11□□□□□ -0.47
CDH3-204ENST00000565453 COL7A1Q02388 2944 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 ERICH4A6NGS2 130 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 BET1O15155 118 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 SLC25A17O43808 307 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 CRYGBP07316 175 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 OR8U9P0C7N5 309 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 GADD45AP24522 165 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 INSL3P51460 131 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 MRPS15P82914 257 aaKnown RBP12.1□□□□□ -0.47
CDH3-204ENST00000565453 SRSF7Q16629 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDH3-204ENST00000565453 ACTBL2Q562R1 376 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 PYHIN1Q6K0P9 492 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 UNQ5815/PRO19632Q6UWF5 114 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 Q6ZS49 121 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 LFNGQ8NES3 379 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 DLX4Q92988 240 aaPredicted RBP12.1□□□□□ -0.47
CDH3-204ENST00000565453 FLYWCH2Q96CP2 140 aaKnown RBP12.1□□□□□ -0.47
CDH3-204ENST00000565453 RHOVQ96L33 236 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 OR2D2Q9H210 308 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 SLC35D1Q9NTN3 355 aa12.1□□□□□ -0.47
CDH3-204ENST00000565453 A0A075B6Q4 140 aa12.09□□□□□ -0.47
CDH3-204ENST00000565453 IGHV4OR15-8A0A075B7B6 117 aa12.09□□□□□ -0.47
CDH3-204ENST00000565453 IGKV1D-8A0A087WSZ0 117 aa12.09□□□□□ -0.47
CDH3-204ENST00000565453 A0A087WW49 117 aa12.09□□□□□ -0.47
CDH3-204ENST00000565453 LINC01619G3V211 115 aa12.09□□□□□ -0.47
CDH3-204ENST00000565453 OVOL1O14753 267 aa12.09□□□□□ -0.47
CDH3-204ENST00000565453 ATP6V1G2O95670 118 aa12.09□□□□□ -0.47
CDH3-204ENST00000565453 SLURP1P55000 103 aa12.09□□□□□ -0.47
CDH3-204ENST00000565453 SPARTQ8N0X7 666 aa12.09□□□□□ -0.47
CDH3-204ENST00000565453 OR10J5Q8NHC4 309 aa12.09□□□□□ -0.47
CDH3-204ENST00000565453 ARPC1AQ92747 370 aa12.09□□□□□ -0.47
CDH3-204ENST00000565453 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDH3-204ENST00000565453 ELF5Q9UKW6 265 aaPredicted RBP12.09□□□□□ -0.47
CDH3-204ENST00000565453 ZNF256Q9Y2P7 627 aaPredicted RBP12.09□□□□□ -0.47
CDH3-204ENST00000565453 SMIM30A4D0T7 59 aa12.08□□□□□ -0.48
CDH3-204ENST00000565453 METTL21EPA6NDL7 271 aa12.08□□□□□ -0.48
CDH3-204ENST00000565453 IGHV3-11P01762 117 aa12.08□□□□□ -0.48
CDH3-204ENST00000565453 FGF9P31371 208 aaPredicted RBP12.08□□□□□ -0.48
CDH3-204ENST00000565453 FXYD3Q14802 87 aa12.08□□□□□ -0.48
CDH3-204ENST00000565453 MRGPRG-AS1Q2M3A8 158 aa12.08□□□□□ -0.48
CDH3-204ENST00000565453 TMEM177Q53S58 311 aa12.08□□□□□ -0.48
CDH3-204ENST00000565453 H1FOOQ8IZA3 346 aaPredicted RBP12.08□□□□□ -0.48
CDH3-204ENST00000565453 MS4A10Q96PG2 267 aa12.08□□□□□ -0.48
CDH3-204ENST00000565453 TXNL4BQ9NX01 149 aaKnown RBP12.08□□□□□ -0.48
CDH3-204ENST00000565453 SRRM4A7MD48 611 aaKnown RBP12.07□□□□□ -0.48
CDH3-204ENST00000565453 NOTOA8MTQ0 251 aa12.07□□□□□ -0.48
CDH3-204ENST00000565453 NHLRC4P0CG21 123 aaPredicted RBP12.07□□□□□ -0.48
CDH3-204ENST00000565453 DTYMKP23919 212 aa12.07□□□□□ -0.48
CDH3-204ENST00000565453 LGALS7P47929 136 aa12.07□□□□□ -0.48
CDH3-204ENST00000565453 TPPP2P59282 170 aa12.07□□□□□ -0.48
CDH3-204ENST00000565453 PJVKQ0ZLH3 352 aa12.07□□□□□ -0.48
CDH3-204ENST00000565453 ZNF429Q86V71 674 aa12.07□□□□□ -0.48
CDH3-204ENST00000565453 BVESQ8NE79 360 aa12.07□□□□□ -0.48
CDH3-204ENST00000565453 GRPEL2Q8TAA5 225 aa12.07□□□□□ -0.48
CDH3-204ENST00000565453 DDB2Q92466 427 aa12.07□□□□□ -0.48
CDH3-204ENST00000565453 SLA2Q9H6Q3 261 aa12.07□□□□□ -0.48
CDH3-204ENST00000565453 HSPB1P04792 205 aaKnown RBP12.06□□□□□ -0.48
CDH3-204ENST00000565453 PSMB9P28065 219 aa12.06□□□□□ -0.48
CDH3-204ENST00000565453 DUTP33316 252 aaKnown RBP12.06□□□□□ -0.48
CDH3-204ENST00000565453 TAGLNQ01995 201 aaKnown RBP12.06□□□□□ -0.48
CDH3-204ENST00000565453 ARFRP1Q13795 201 aa12.06□□□□□ -0.48
CDH3-204ENST00000565453 ARL6IP1Q15041 203 aa12.06□□□□□ -0.48
CDH3-204ENST00000565453 CDNFQ49AH0 187 aa12.06□□□□□ -0.48
CDH3-204ENST00000565453 ACSM6Q6P461 480 aa12.06□□□□□ -0.48
CDH3-204ENST00000565453 HARBI1Q96MB7 349 aa12.06□□□□□ -0.48
CDH3-204ENST00000565453 WWC2-AS2Q96NR7 200 aa12.06□□□□□ -0.48
CDH3-204ENST00000565453 ATG5Q9H1Y0 275 aa12.06□□□□□ -0.48
CDH3-204ENST00000565453 STUB1Q9UNE7 303 aa12.06□□□□□ -0.48
CDH3-204ENST00000565453 H3BUA1 57 aa12.05□□□□□ -0.48
CDH3-204ENST00000565453 SAP30O75446 220 aa12.05□□□□□ -0.48
CDH3-204ENST00000565453 TALDO1P37837 337 aa12.05□□□□□ -0.48
CDH3-204ENST00000565453 POC5Q8NA72 575 aa12.05□□□□□ -0.48
CDH3-204ENST00000565453 FCGR1BQ92637 280 aa12.05□□□□□ -0.48
CDH3-204ENST00000565453 GINS4Q9BRT9 223 aa12.05□□□□□ -0.48
CDH3-204ENST00000565453 CENPOQ9BU64 300 aa12.05□□□□□ -0.48
CDH3-204ENST00000565453 YTHDF1Q9BYJ9 559 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms