RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SERPINA7P05543 415 aa17.27■□□□□ 0.36
MAP1LC3B-206ENST00000564844 IGHV3-43DP0DP04 118 aa17.27■□□□□ 0.36
MAP1LC3B-206ENST00000564844 B3GALT5-AS1P59052 145 aa17.27■□□□□ 0.36
MAP1LC3B-206ENST00000564844 TUSC5Q8IXB3 177 aa17.27■□□□□ 0.36
MAP1LC3B-206ENST00000564844 PATE3B3GLJ2 98 aa17.27■□□□□ 0.36
MAP1LC3B-206ENST00000564844 COX6A1P12074 109 aa17.27■□□□□ 0.36
MAP1LC3B-206ENST00000564844 OR5I1Q13606 314 aa17.27■□□□□ 0.36
MAP1LC3B-206ENST00000564844 LINC01551Q86U37 167 aa17.27■□□□□ 0.36
MAP1LC3B-206ENST00000564844 CISD2Q8N5K1 135 aaKnown RBP17.27■□□□□ 0.36
MAP1LC3B-206ENST00000564844 GGCTO75223 188 aaKnown RBP17.27■□□□□ 0.35
MAP1LC3B-206ENST00000564844 RAB4BP61018 213 aa17.27■□□□□ 0.35
MAP1LC3B-206ENST00000564844 MRPL14Q6P1L8 145 aaKnown RBP17.27■□□□□ 0.35
MAP1LC3B-206ENST00000564844 OR10P1Q8NGE3 313 aa17.27■□□□□ 0.35
MAP1LC3B-206ENST00000564844 RFESDQ8TAC1 157 aa17.27■□□□□ 0.35
MAP1LC3B-206ENST00000564844 CMTM2Q8TAZ6 248 aa17.27■□□□□ 0.35
MAP1LC3B-206ENST00000564844 OR2D2Q9H210 308 aa17.27■□□□□ 0.35
MAP1LC3B-206ENST00000564844 EP300Q09472 2414 aaPredicted RBP17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 PINLYPA6NC86 204 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 TMEM250H0YL14 139 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 S1PR2O95136 353 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 CELA3AP09093 270 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 PDLIM4P50479 330 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 TNFSF10P50591 281 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 ASPHD1Q5U4P2 390 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 ANAPC16Q96DE5 110 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 LAMA5O15230 3695 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 CNOT1A5YKK6 2376 aaKnown RBP17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 COX5AP20674 150 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 CCKARP32238 428 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 TRIM61Q5EBN2 209 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 Q6ZWC4 215 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 NPCDR1Q9BY65 106 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 DEPPQ9NTK1 212 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 CADP27708 2225 aa17.26■□□□□ 0.35
MAP1LC3B-206ENST00000564844 SLC25A6P12236 298 aa17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 RAB4AP20338 218 aa17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 ARSJQ5FYB0 599 aaPredicted RBP17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 SPINK14Q6IE38 97 aa17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 NUFIP2Q7Z417 695 aaKnown RBP17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 CARFQ8N187 725 aa17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 TRAV34A0A0B4J273 112 aa17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 ODAMA1E959 279 aa17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 SRFP11831 508 aa17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 OR10J1P30954 320 aa17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 CDC34P49427 236 aaPredicted RBP17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 SSPNQ14714 243 aa17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 KIAA1644Q3SXP7 199 aa17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 OR52L2PQ8NGH6 319 aa17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 IMMP1LQ96LU5 166 aa17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 AGMATQ9BSE5 352 aa17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 SF3B5Q9BWJ5 86 aaKnown RBP17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 HIPK2Q9H2X6 1198 aa17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 RYDENQ9NUL5 291 aaKnown RBP17.25■□□□□ 0.35
MAP1LC3B-206ENST00000564844 RNPS1Q15287 305 aaKnown RBP17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 C12orf49Q9H741 205 aa17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 TRBV20OR9-2A0A075B6H5 130 aa17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 GJE1A6NN92 205 aa17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 C17orf98A8MV24 154 aa17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 DLEU1O43261 78 aa17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 RPLP1P05386 114 aaKnown RBP17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 GRPP07492 148 aa17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 SAMD10Q9BYL1 202 aa17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 LIN7CQ9NUP9 197 aaKnown RBP17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 ZNF391Q9UJN7 358 aa17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 ARFGEF3Q5TH69 2177 aa17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 FAM166BA8MTA8 275 aa17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 SERF1AO75920 110 aa17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 KRTDAPP60985 99 aa17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 RPL15P61313 204 aaKnown RBP17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 Q6ZS49 121 aa17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 LSM10Q969L4 123 aaKnown RBP17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 WDYHV1Q96HA8 205 aa17.24■□□□□ 0.35
MAP1LC3B-206ENST00000564844 MARCH11A6NNE9 402 aa17.23■□□□□ 0.35
MAP1LC3B-206ENST00000564844 CDIPTO14735 213 aa17.23■□□□□ 0.35
MAP1LC3B-206ENST00000564844 OR2H2O95918 312 aa17.23■□□□□ 0.35
MAP1LC3B-206ENST00000564844 PRR31Q5SQ13 230 aa17.23■□□□□ 0.35
MAP1LC3B-206ENST00000564844 TMEM14EPQ6UXP3 125 aa17.23■□□□□ 0.35
MAP1LC3B-206ENST00000564844 Q6ZVH6 145 aa17.23■□□□□ 0.35
MAP1LC3B-206ENST00000564844 BAGE3Q86Y29 109 aa17.23■□□□□ 0.35
MAP1LC3B-206ENST00000564844 BAGE2Q86Y30 109 aa17.23■□□□□ 0.35
MAP1LC3B-206ENST00000564844 DTD1Q8TEA8 209 aa17.23■□□□□ 0.35
MAP1LC3B-206ENST00000564844 ZCCHC14Q8WYQ9 949 aaKnown RBP17.23■□□□□ 0.35
MAP1LC3B-206ENST00000564844 SPSB4Q96A44 273 aa17.23■□□□□ 0.35
MAP1LC3B-206ENST00000564844 HES7Q9BYE0 225 aa17.23■□□□□ 0.35
MAP1LC3B-206ENST00000564844 ANKRD30BLA7E2S9 258 aa17.23■□□□□ 0.35
MAP1LC3B-206ENST00000564844 PRDM14Q9GZV8 571 aa17.23■□□□□ 0.35
MAP1LC3B-206ENST00000564844 A0A1W2PPV4 95 aa17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 KLF7O75840 302 aaPredicted RBP17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 KITLGP21583 273 aa17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 ZNF90Q03938 601 aa17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 KRTAP27-1Q3LI81 207 aa17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 RNF114Q9Y508 228 aa17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 TMEM147Q9BVK8 224 aa17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 PXMP4Q9Y6I8 212 aa17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 KIAA1549Q9HCM3 1950 aa17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 SCO2A0A1W2PP80 73 aa17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 TMEM210A6NLX4 147 aa17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 TCF21O43680 179 aa17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 SRP14P37108 136 aaKnown RBP17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 HLA-DRB5Q30154 266 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms