RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 CCL28Q9NRJ3 127 aa3.99□□□□□ -1.77
CAPN3-212ENST00000564503 SLC39A9Q9NUM3 307 aa3.99□□□□□ -1.77
CAPN3-212ENST00000564503 FKBP11Q9NYL4 201 aa3.99□□□□□ -1.77
CAPN3-212ENST00000564503 ZNF581Q9P0T4 197 aa3.99□□□□□ -1.77
CAPN3-212ENST00000564503 SEMA5BQ9P283 1151 aa3.99□□□□□ -1.77
CAPN3-212ENST00000564503 NAGKQ9UJ70 344 aa3.99□□□□□ -1.77
CAPN3-212ENST00000564503 FUT9Q9Y231 359 aa3.99□□□□□ -1.77
CAPN3-212ENST00000564503 PI4KAP42356 2102 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 PKD1L2Q7Z442 2459 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 IGHV1OR21-1A0A087WYE8 117 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 TRBV6-6A0A0A6YYG2 114 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 IGKV1D-13A0A0B4J2D9 117 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 hCG_38984A0A1B0GV85 526 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 A0A1W2PPQ1 181 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 OR6C6A6NF89 314 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 ZNF705FA8MVS1 300 aaPredicted RBP3.98□□□□□ -1.77
CAPN3-212ENST00000564503 FAM90A26D6RGX4 464 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 LMO7DNF2Z398 122 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 PGLYRP1O75594 196 aaPredicted RBP3.98□□□□□ -1.77
CAPN3-212ENST00000564503 OR7C1O76099 320 aaPredicted RBP3.98□□□□□ -1.77
CAPN3-212ENST00000564503 NXPH3O95157 252 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 NAPSAO96009 420 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 CA3P07451 260 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 SCTP09683 121 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 ZNF705DP0CH99 300 aaPredicted RBP3.98□□□□□ -1.77
CAPN3-212ENST00000564503 ZNF705BP0CI00 300 aaPredicted RBP3.98□□□□□ -1.77
CAPN3-212ENST00000564503 IGKV1-13P0DP09 117 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 CD99P14209 185 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 EGR1P18146 543 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 F2RP25116 425 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 OR1D5P58170 312 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 UBE2NP61088 152 aaKnown RBP3.98□□□□□ -1.77
CAPN3-212ENST00000564503 PCBD1P61457 104 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 HNRNPKP61978 463 aaKnown RBP eCLIP3.98□□□□□ -1.77
CAPN3-212ENST00000564503 PPP1CBP62140 327 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 LCN2P80188 198 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 SLC38A11Q08AI6 406 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 HERPUD1Q15011 391 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 ATP6V1FQ16864 119 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 KHDC1LQ5JSQ8 128 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 SHISA6Q6ZSJ9 500 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 LINC00596Q86U02 117 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 ZNF573Q86YE8 665 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 C17orf78Q8N4C9 275 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 ZNF611Q8N823 705 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 OR10G3Q8NGC4 313 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 IFI44Q8TCB0 444 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 MRPL30Q8TCC3 161 aaKnown RBP3.98□□□□□ -1.77
CAPN3-212ENST00000564503 TMEM37Q8WXS4 190 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 TAF15Q92804 592 aaKnown RBP eCLIP3.98□□□□□ -1.77
CAPN3-212ENST00000564503 RPUSD4Q96CM3 377 aaKnown RBP3.98□□□□□ -1.77
CAPN3-212ENST00000564503 SPACA9Q96E40 222 aaPredicted RBP3.98□□□□□ -1.77
CAPN3-212ENST00000564503 FER1L6-AS2Q96M78 137 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 ZNF385AQ96PM9 386 aaKnown RBP3.98□□□□□ -1.77
CAPN3-212ENST00000564503 C20orf144Q9BQM9 153 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 ATG101Q9BSB4 218 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 PCGF1Q9BSM1 259 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 PARLQ9H300 379 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 RBKSQ9H477 322 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 CHODLQ9H9P2 273 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 CBLN4Q9NTU7 201 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 C19orf25Q9UFG5 118 aaPredicted RBP3.98□□□□□ -1.77
CAPN3-212ENST00000564503 CD207Q9UJ71 328 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 GOLT1BQ9Y3E0 138 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 TRAPPC1Q9Y5R8 145 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 DSCAML1Q8TD84 2053 aa3.98□□□□□ -1.77
CAPN3-212ENST00000564503 SPAG17Q6Q759 2223 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 TRGV11A0A075B6L2 103 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 TRAV9-1A0A075B6T8 112 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 A0A0G2JRQ6 117 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 UBE2L5PA0A1B0GUS4 154 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 A0A1W2PR77 199 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 LNP1A1A4G5 178 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 LRRC3CA6NJW4 275 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 GJE1A6NN92 205 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 NPIPB11E5RHQ5 1161 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 F6UZH7 168 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 H3BP45 60 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 SLC33A1O00400 549 aaPredicted RBP3.97□□□□□ -1.77
CAPN3-212ENST00000564503 DEGS1O15121 323 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 LINC01565O15544 149 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 MLNRO43193 412 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 DNPH1O43598 174 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 TNFSF13O75888 250 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 SERPINE2P07093 398 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 CD55P08174 381 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 CYC1P08574 325 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 MMP7P09237 267 aaPredicted RBP3.97□□□□□ -1.77
CAPN3-212ENST00000564503 FTH1P19P0C7X4 201 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 IAPPP10997 89 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 PSG2P11465 335 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 ZNF32P17041 273 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 BCL3P20749 454 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 CD27P26842 260 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 OR3A1P47881 315 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 TNFSF10P50591 281 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 DSCR4P56555 118 aaPredicted RBP3.97□□□□□ -1.77
CAPN3-212ENST00000564503 TPPP2P59282 170 aa3.97□□□□□ -1.77
CAPN3-212ENST00000564503 RPL15P61313 204 aaKnown RBP3.97□□□□□ -1.77
CAPN3-212ENST00000564503 FGF12P61328 243 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms