RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 LIPKQ5VXJ0 399 aa7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 SLC25A48Q6ZT89 311 aaKnown RBP7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 KRTAP19-1Q8IUB9 90 aa7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 GID4Q8IVV7 300 aa7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 PXT1Q8NFP0 134 aa7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 OR52M1Q8NGK5 317 aa7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 KCNG3Q8TAE7 436 aa7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 TEX12Q9BXU0 123 aa7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 IFT22Q9H7X7 185 aa7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 GFOD1Q9NXC2 390 aa7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 FCN1O00602 326 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 GNGT2O14610 69 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 CSTBP04080 98 aaKnown RBP7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 DBTP11182 482 aaKnown RBP7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 IL3RAP26951 378 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 CCR9P51686 369 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 MNAT1P51948 309 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 IL13RA2Q14627 380 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 CT45A1Q5HYN5 189 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 Q6ZSA8 131 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 PARP16Q8N5Y8 322 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 OR5T1Q8NG75 326 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 OR10H4Q8NGA5 316 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 CT45A3Q8NHU0 189 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 PELI1Q96FA3 418 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 ADI1Q9BV57 179 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 MED4Q9NPJ6 270 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 GNG8Q9UK08 70 aa7.33□□□□□ -1.24
HDGFL3-204ENST00000563790 GABRPO00591 440 aa7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 DCTN3O75935 186 aa7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 GHRHP01286 108 aa7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 HOXB6P17509 224 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 KCNJ3P48549 501 aa7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 ODF1Q14990 250 aa7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 ZSCAN26Q16670 478 aa7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 Q3ZCU0 254 aa7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 NHLRC3Q5JS37 347 aa7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 ZNF497Q6ZNH5 498 aa7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 ODF3L1Q8IXM7 274 aa7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 SUMF2Q8NBJ7 301 aa7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 OR51A2Q8NGJ7 313 aa7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 OR10K1Q8NGX5 313 aa7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 NSL1Q96IY1 281 aa7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 DPCDQ9BVM2 203 aaPredicted RBP7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 C5orf66Q9H5L9 145 aa7.32□□□□□ -1.24
HDGFL3-204ENST00000563790 IGHV3-43A0A0B4J1X8 118 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 SLC16A6O15403 523 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 SULT1B1O43704 296 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 ORC5O43913 435 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 C8orf88P0DMB2 117 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 IGHV3-43DP0DP04 118 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 TMEM225BP0DP42 221 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 GZMHP20718 246 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 TMED1Q13445 227 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 GPHB5Q86YW7 130 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 GAPTQ8N292 157 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 OR13C3Q8NGS6 347 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 NR1H4Q96RI1 486 aaPredicted RBP7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 KRTAP4-7Q9BYR0 210 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 PRRG3Q9BZD7 231 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 GABARAPL1Q9H0R8 117 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 FBXL15Q9H469 300 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 H2AFY2Q9P0M6 372 aaPredicted RBP7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 RCC2Q9P258 522 aaKnown RBP7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 DMRT1Q9Y5R6 373 aa7.31□□□□□ -1.24
HDGFL3-204ENST00000563790 IGLV5-52A0A0A0MRZ9 124 aa7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 OR4C46A6NHA9 309 aa7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 E9PI62 339 aa7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 SDCBPO00560 298 aaPredicted RBP7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 LANCL1O43813 399 aa7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 MT-ND4P03905 459 aa7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 GIG44P09565 113 aaPredicted RBP7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 CALB2P22676 271 aa7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 OR3A3P47888 321 aa7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 GYS2P54840 703 aa7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 RBM11P57052 281 aaKnown RBP7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 ZNF562Q6V9R5 426 aa7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 ARL11Q969Q4 196 aa7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 CIB1Q99828 191 aa7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 GABARAPL3Q9BY60 117 aa7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 NEK6Q9HC98 313 aa7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 ZNF586Q9NXT0 402 aa7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 IL36GQ9NZH8 169 aa7.3□□□□□ -1.24
HDGFL3-204ENST00000563790 A0A1W2PP11 408 aa7.29□□□□□ -1.24
HDGFL3-204ENST00000563790 TMEM30CPA0ZSE6 113 aa7.29□□□□□ -1.24
HDGFL3-204ENST00000563790 PANO1I0J062 215 aa7.29□□□□□ -1.24
HDGFL3-204ENST00000563790 GEMIN2O14893 280 aaKnown RBP7.29□□□□□ -1.24
HDGFL3-204ENST00000563790 HLA-AP01891 365 aaKnown RBP7.29□□□□□ -1.24
HDGFL3-204ENST00000563790 SPART-AS1P0CW21 52 aa7.29□□□□□ -1.24
HDGFL3-204ENST00000563790 MED21Q13503 144 aa7.29□□□□□ -1.24
HDGFL3-204ENST00000563790 ALKBH1Q13686 389 aaKnown RBP7.29□□□□□ -1.24
HDGFL3-204ENST00000563790 ATP6AP1Q15904 470 aa7.29□□□□□ -1.24
HDGFL3-204ENST00000563790 TMEM41BQ5BJD5 291 aa7.29□□□□□ -1.24
HDGFL3-204ENST00000563790 TMEM69Q5SWH9 247 aa7.29□□□□□ -1.24
HDGFL3-204ENST00000563790 ATAD3CQ5T2N8 411 aa7.29□□□□□ -1.24
HDGFL3-204ENST00000563790 FAM220AQ7Z4H9 259 aa7.29□□□□□ -1.24
HDGFL3-204ENST00000563790 ADAD2Q8NCV1 583 aaKnown RBP7.29□□□□□ -1.24
HDGFL3-204ENST00000563790 OR8J1Q8NGP2 316 aa7.29□□□□□ -1.24
HDGFL3-204ENST00000563790 MARC2Q969Z3 335 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms