RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 VBP1P61758 197 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 ARF6P62330 175 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 RPL31P62899 125 aaKnown RBP3.62□□□□□ -1.83
SMG1-206ENST00000562668 PRB3Q04118 309 aaPredicted RBP3.62□□□□□ -1.83
SMG1-206ENST00000562668 MXD1Q05195 221 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 SCN1BQ07699 218 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 ATXN7L3Q14CW9 347 aaPredicted RBP3.62□□□□□ -1.83
SMG1-206ENST00000562668 SPCS2Q15005 226 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 RAB11BQ15907 218 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 GPR107Q5VW38 600 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 OLFML2AQ68BL7 652 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 ZNF880Q6PDB4 577 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 FIP1L1Q6UN15 594 aaKnown RBP3.62□□□□□ -1.83
SMG1-206ENST00000562668 C6orf201Q7Z4U5 140 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 VMO1Q7Z5L0 202 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 ASCC1Q8N9N2 400 aaKnown RBP3.62□□□□□ -1.83
SMG1-206ENST00000562668 OR5D13Q8NGL4 314 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 OR2T6Q8NHC8 308 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 NDNFQ8TB73 568 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 MRPL30Q8TCC3 161 aaKnown RBP3.62□□□□□ -1.83
SMG1-206ENST00000562668 LGALS14Q8TCE9 139 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 SLC25A46Q96AG3 418 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 TMEM59Q9BXS4 323 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 CST11Q9H112 138 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 PLGRKTQ9HBL7 147 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 VCX3AQ9NNX9 186 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 ZNF69Q9UC07 566 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 KIF25Q9UIL4 384 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 ELF5Q9UKW6 265 aaPredicted RBP3.62□□□□□ -1.83
SMG1-206ENST00000562668 AUP1Q9Y679 476 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 LINC00312Q9Y6C7 94 aa3.62□□□□□ -1.83
SMG1-206ENST00000562668 HIVEP2P31629 2446 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 ANK2Q01484 3957 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 TRBV6-6A0A0A6YYG2 114 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 TRAV39A0A0B4J263 110 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 C12orf77C9JDV5 145 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 H3BMQ9 156 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 GPR137BO60478 399 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 IGLV1-47P01700 117 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 ZNF728P0DKX0 622 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 IGHV1-8P0DP01 117 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 TMEM11P17152 192 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 FUT3P21217 361 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 CD34P28906 385 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 TMBIM6P55061 237 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 EDDM3BP56851 147 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 KLRD1Q13241 179 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 EDDM3AQ14507 147 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 TIMM50Q3ZCQ8 353 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 PAN3Q58A45 887 aaKnown RBP3.61□□□□□ -1.83
SMG1-206ENST00000562668 KRBOX4Q5JUW0 171 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 RAB12Q6IQ22 244 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 BTNL3Q6UXE8 466 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 HEPN1Q6WQI6 88 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 GDPD3Q7L5L3 318 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 GPR141Q7Z602 305 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 CCDC190Q86UF4 302 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 CLVS1Q8IUQ0 354 aaPredicted RBP3.61□□□□□ -1.83
SMG1-206ENST00000562668 DYNAPQ8N1N2 210 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 PNKDQ8N490 385 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 OR11H6Q8NGC7 330 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 ZNF596Q8TC21 504 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 DYNC2LI1Q8TCX1 351 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 C17orf50Q8WW18 174 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 H1FXQ92522 213 aaKnown RBP3.61□□□□□ -1.83
SMG1-206ENST00000562668 ARHGAP5-AS1Q96IT6 56 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 ZNF714Q96N38 554 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 S100A13Q99584 98 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 BCL7BQ9BQE9 202 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 FAAP24Q9BTP7 215 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 PECRQ9BY49 303 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 ABCG5Q9H222 651 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 METTL8Q9H825 291 aaKnown RBP3.61□□□□□ -1.83
SMG1-206ENST00000562668 SPACA1Q9HBV2 294 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.61□□□□□ -1.83
SMG1-206ENST00000562668 SIRT7Q9NRC8 400 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 TAS2R3Q9NYW6 316 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 ABRACLQ9P1F3 81 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 GLS2Q9UI32 602 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 AK3Q9UIJ7 227 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 DAPK2Q9UIK4 370 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 NUP50Q9UKX7 468 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 RAB22AQ9UL26 194 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 PEX16Q9Y5Y5 336 aa3.61□□□□□ -1.83
SMG1-206ENST00000562668 NIPBLQ6KC79 2804 aaeCLIP3.61□□□□□ -1.83
SMG1-206ENST00000562668 SETD2Q9BYW2 2564 aaPredicted RBP3.6□□□□□ -1.83
SMG1-206ENST00000562668 WNK2Q9Y3S1 2297 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 IGHV3OR16-10A0A075B7F0 116 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 IGKV1D-8A0A087WSZ0 117 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 MEIKINA0A087WXM9 373 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 TRAV40A0A0B4J280 105 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 IGHV1-69DA0A0B4J2H0 117 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 IGKV1-6A0A0C4DH72 117 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 KBTBD11-OT1A0A1B0GTJ5 212 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 MDFIC2A0A1B0GVS7 189 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 A0A1W2PQ09 198 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 hADV38S2A0JD32 116 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 TMEM30CPA0ZSE6 113 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 ZNF729A6NN14 1252 aaPredicted RBP3.6□□□□□ -1.83
SMG1-206ENST00000562668 LY6LH3BQJ8 138 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms