RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ITGB1BP1O14713 200 aa8.13□□□□□ -1.11
SMG1-205ENST00000561947 TNFRSF1AP19438 455 aa8.13□□□□□ -1.11
SMG1-205ENST00000561947 NPBWR1P48145 328 aa8.13□□□□□ -1.11
SMG1-205ENST00000561947 TMEM14EPQ6UXP3 125 aa8.13□□□□□ -1.11
SMG1-205ENST00000561947 DPPA3Q6W0C5 159 aa8.13□□□□□ -1.11
SMG1-205ENST00000561947 ZNF788Q6ZQV5 615 aa8.13□□□□□ -1.11
SMG1-205ENST00000561947 THNSL2Q86YJ6 484 aa8.13□□□□□ -1.11
SMG1-205ENST00000561947 PBDC1Q9BVG4 233 aa8.13□□□□□ -1.11
SMG1-205ENST00000561947 EIF5A2Q9GZV4 153 aaKnown RBP8.13□□□□□ -1.11
SMG1-205ENST00000561947 KPTNQ9Y664 436 aa8.13□□□□□ -1.11
SMG1-205ENST00000561947 ICE1Q9Y2F5 2266 aa8.13□□□□□ -1.11
SMG1-205ENST00000561947 ATMQ13315 3056 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 TRGV10A0A0A0MS01 117 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 A0A1B0GW64 132 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 M0R1X1 148 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 GYPAP02724 150 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 PPT1P50897 306 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 ZNF134P52741 427 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 TGIF2LYQ8IUE0 185 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 LILRB2Q8N423 598 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 SCGB1C1Q8TD33 95 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 CCL13Q99616 98 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 GFOD1Q9NXC2 390 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 DCAF16Q9NXF7 216 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 KBTBD11-OT1A0A1B0GTJ5 212 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 A0A1B0GV50 99 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 BTBD17A6NE02 478 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 MARCH11A6NNE9 402 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 PPIHO43447 177 aaKnown RBP8.12□□□□□ -1.11
SMG1-205ENST00000561947 OR8U8P0C7N1 319 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 ATF4P18848 351 aaPredicted RBP8.12□□□□□ -1.11
SMG1-205ENST00000561947 RAB7AP51149 207 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 CCL8P80075 99 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 RPL39P5Q59GN2 51 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 ADAM5Q6NVV9 412 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 SPSB3Q6PJ21 355 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 TCF23Q7RTU1 214 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 FAM216BQ8N7L0 139 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 R3HDM4Q96D70 268 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 VKORC1Q9BQB6 163 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 PARD6GQ9BYG4 376 aaPredicted RBP8.12□□□□□ -1.11
SMG1-205ENST00000561947 CLN8Q9UBY8 286 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 GAB2Q9UQC2 676 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 FBXO7Q9Y3I1 522 aa8.12□□□□□ -1.11
SMG1-205ENST00000561947 HCFC1P51610 2035 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 DMXL2Q8TDJ6 3036 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 SLC31A2O15432 143 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 FCGR3BO75015 233 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 HPRT1P00492 218 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 H2AFB1P0C5Y9 115 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 UCNP55089 124 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 SLC38A11Q08AI6 406 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 LRRC75BQ2VPJ9 315 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 DHRS7BQ6IAN0 325 aaPredicted RBP8.11□□□□□ -1.11
SMG1-205ENST00000561947 WFIKKN1Q96NZ8 548 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 OR4C12Q96R67 309 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 PSMG3Q9BT73 122 aaPredicted RBP8.11□□□□□ -1.11
SMG1-205ENST00000561947 PTPRQQ9UMZ3 2332 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 NKX6-3A6NJ46 265 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 RBFOX2O43251 390 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMG1-205ENST00000561947 IGHV3-7P01780 117 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 CCL20P78556 96 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 TLE4Q04727 773 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 UTF1Q5T230 341 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 SP5Q6BEB4 398 aaPredicted RBP8.11□□□□□ -1.11
SMG1-205ENST00000561947 TMEM88Q6PEY1 159 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 CLRN3Q8NCR9 226 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 DTD1Q8TEA8 209 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 CIB3Q96Q77 187 aaPredicted RBP8.11□□□□□ -1.11
SMG1-205ENST00000561947 RSG1Q9BU20 258 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 HIPK2Q9H2X6 1198 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 NGBQ9NPG2 151 aa8.11□□□□□ -1.11
SMG1-205ENST00000561947 ZNF729A6NN14 1252 aaPredicted RBP8.1□□□□□ -1.11
SMG1-205ENST00000561947 FAM90A9PA6NNJ1 464 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 VSTM5A8MXK1 200 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 ATXN7O15265 892 aaPredicted RBP8.1□□□□□ -1.11
SMG1-205ENST00000561947 ZG16O60844 167 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 KIR2DS2P43631 304 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 TLE1Q04724 770 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 CORO2AQ92828 525 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 LEAP2Q969E1 77 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 WDR61Q9GZS3 305 aaKnown RBP8.1□□□□□ -1.11
SMG1-205ENST00000561947 IDI2-AS1Q9NZ38 188 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 KIAA1456Q9P272 454 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 RAXQ9Y2V3 346 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 PRELID3BQ9Y3B1 194 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 TRGV8A0A0C4DH27 118 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 RBMXL2O75526 392 aaKnown RBP8.1□□□□□ -1.11
SMG1-205ENST00000561947 HBE1P02100 147 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 OR9G9P0C7N8 305 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 TMEM30BQ3MIR4 351 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 AARDQ4LEZ3 155 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 CT45A1Q5HYN5 189 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 OR8G2PQ6IF36 304 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 CBLN2Q8IUK8 224 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 ZCCHC24Q8N2G6 241 aaKnown RBP8.1□□□□□ -1.11
SMG1-205ENST00000561947 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.1□□□□□ -1.11
SMG1-205ENST00000561947 CT45A3Q8NHU0 189 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 DDB2Q92466 427 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 ZDHHC16Q969W1 377 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms