RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 RSBN1Q5VWQ0 802 aaPredicted RBP2.57□□□□□ -2
HERC1-211ENST00000560983 ZNF497Q6ZNH5 498 aa2.57□□□□□ -2
HERC1-211ENST00000560983 Q6ZRN7 208 aaPredicted RBP2.57□□□□□ -2
HERC1-211ENST00000560983 RBPMS2Q6ZRY4 209 aaKnown RBP2.57□□□□□ -2
HERC1-211ENST00000560983 RRM2BQ7LG56 351 aa2.57□□□□□ -2
HERC1-211ENST00000560983 VTCN1Q7Z7D3 282 aa2.57□□□□□ -2
HERC1-211ENST00000560983 NOXA1Q86UR1 476 aa2.57□□□□□ -2
HERC1-211ENST00000560983 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.57□□□□□ -2
HERC1-211ENST00000560983 Q8IYB0 196 aa2.57□□□□□ -2
HERC1-211ENST00000560983 SLC38A6Q8IZM9 456 aa2.57□□□□□ -2
HERC1-211ENST00000560983 SLC37A3Q8NCC5 494 aa2.57□□□□□ -2
HERC1-211ENST00000560983 CLCC1Q96S66 551 aa2.57□□□□□ -2
HERC1-211ENST00000560983 SPAG8Q99932 426 aaPredicted RBP2.57□□□□□ -2
HERC1-211ENST00000560983 FUZQ9BT04 418 aa2.57□□□□□ -2
HERC1-211ENST00000560983 PBOV1Q9GZY1 135 aa2.57□□□□□ -2
HERC1-211ENST00000560983 C5orf66Q9H5L9 145 aa2.57□□□□□ -2
HERC1-211ENST00000560983 INTS9Q9NV88 658 aaKnown RBP2.57□□□□□ -2
HERC1-211ENST00000560983 ZNF221Q9UK13 617 aa2.57□□□□□ -2
HERC1-211ENST00000560983 CDH10Q9Y6N8 788 aa2.57□□□□□ -2
HERC1-211ENST00000560983 V9GYS6 101 aa2.57□□□□□ -2
HERC1-211ENST00000560983 DSCAML1Q8TD84 2053 aa2.56□□□□□ -2
HERC1-211ENST00000560983 TRBV9A0A0B4J1U6 114 aa2.56□□□□□ -2
HERC1-211ENST00000560983 IGHV3-43A0A0B4J1X8 118 aa2.56□□□□□ -2
HERC1-211ENST00000560983 TRBV4-1A0A0J9YWV2 114 aa2.56□□□□□ -2
HERC1-211ENST00000560983 TMEM269A0A1B0GVZ9 245 aa2.56□□□□□ -2
HERC1-211ENST00000560983 A0A1W2PPQ1 181 aa2.56□□□□□ -2
HERC1-211ENST00000560983 A0A1W2PRQ8 180 aa2.56□□□□□ -2
HERC1-211ENST00000560983 SMIM23A6NLE4 172 aa2.56□□□□□ -2
HERC1-211ENST00000560983 A8MWP6 167 aa2.56□□□□□ -2
HERC1-211ENST00000560983 SDCBPO00560 298 aaPredicted RBP2.56□□□□□ -2
HERC1-211ENST00000560983 ZSCAN12O43309 604 aa2.56□□□□□ -2
HERC1-211ENST00000560983 GGCTO75223 188 aaKnown RBP2.56□□□□□ -2
HERC1-211ENST00000560983 CA2P00918 260 aa2.56□□□□□ -2
HERC1-211ENST00000560983 IFNA5P01569 189 aa2.56□□□□□ -2
HERC1-211ENST00000560983 TTRP02766 147 aa2.56□□□□□ -2
HERC1-211ENST00000560983 PRSS1P07477 247 aa2.56□□□□□ -2
HERC1-211ENST00000560983 IGHV3-43DP0DP04 118 aa2.56□□□□□ -2
HERC1-211ENST00000560983 ZNF44P15621 663 aa2.56□□□□□ -2
HERC1-211ENST00000560983 H2AFXP16104 143 aaPredicted RBP2.56□□□□□ -2
HERC1-211ENST00000560983 GZMHP20718 246 aa2.56□□□□□ -2
HERC1-211ENST00000560983 IL3RAP26951 378 aa2.56□□□□□ -2
HERC1-211ENST00000560983 KDELR2P33947 212 aa2.56□□□□□ -2
HERC1-211ENST00000560983 RPS27AP62979 156 aaKnown RBP2.56□□□□□ -2
HERC1-211ENST00000560983 MED21Q13503 144 aa2.56□□□□□ -2
HERC1-211ENST00000560983 DGCR6Q14129 220 aa2.56□□□□□ -2
HERC1-211ENST00000560983 CRMP1Q14194 572 aa2.56□□□□□ -2
HERC1-211ENST00000560983 FXYD3Q14802 87 aa2.56□□□□□ -2
HERC1-211ENST00000560983 MED22Q15528 200 aa2.56□□□□□ -2
HERC1-211ENST00000560983 Q3ZCU0 254 aa2.56□□□□□ -2
HERC1-211ENST00000560983 UNQ9165/PRO28630Q6UXU0 137 aa2.56□□□□□ -2
HERC1-211ENST00000560983 ERI1Q8IV48 349 aaKnown RBP2.56□□□□□ -2
HERC1-211ENST00000560983 CENPSQ8N2Z9 138 aa2.56□□□□□ -2
HERC1-211ENST00000560983 C17orf53Q8N3J3 647 aaPredicted RBP2.56□□□□□ -2
HERC1-211ENST00000560983 CHST4Q8NCG5 386 aa2.56□□□□□ -2
HERC1-211ENST00000560983 ADAD2Q8NCV1 583 aaKnown RBP2.56□□□□□ -2
HERC1-211ENST00000560983 OTOSQ8NHW6 89 aa2.56□□□□□ -2
HERC1-211ENST00000560983 PLPPR1Q8TBJ4 325 aa2.56□□□□□ -2
HERC1-211ENST00000560983 FANK1Q8TC84 345 aa2.56□□□□□ -2
HERC1-211ENST00000560983 THRSPQ92748 146 aa2.56□□□□□ -2
HERC1-211ENST00000560983 TPD52L3Q96J77 140 aa2.56□□□□□ -2
HERC1-211ENST00000560983 INTS14Q96SY0 518 aa2.56□□□□□ -2
HERC1-211ENST00000560983 CGREF1Q99674 301 aa2.56□□□□□ -2
HERC1-211ENST00000560983 NICN1Q9BSH3 213 aa2.56□□□□□ -2
HERC1-211ENST00000560983 MRPL20Q9BYC9 149 aaKnown RBP2.56□□□□□ -2
HERC1-211ENST00000560983 ANKRD19PQ9H560 264 aa2.56□□□□□ -2
HERC1-211ENST00000560983 TAS2R1Q9NYW7 299 aa2.56□□□□□ -2
HERC1-211ENST00000560983 CCDC167Q9P0B6 97 aa2.56□□□□□ -2
HERC1-211ENST00000560983 SAMD4AQ9UPU9 718 aaKnown RBP2.56□□□□□ -2
HERC1-211ENST00000560983 IGKV1-9A0A0C4DH69 117 aa2.55□□□□□ -2
HERC1-211ENST00000560983 A0A1B0GW64 132 aa2.55□□□□□ -2
HERC1-211ENST00000560983 ZNF320A2RRD8 509 aa2.55□□□□□ -2
HERC1-211ENST00000560983 TRPC5OSA6NMA1 111 aa2.55□□□□□ -2
HERC1-211ENST00000560983 DHRS7CA6NNS2 312 aa2.55□□□□□ -2
HERC1-211ENST00000560983 PRR32B1ATL7 298 aa2.55□□□□□ -2
HERC1-211ENST00000560983 BIRC5O15392 142 aa2.55□□□□□ -2
HERC1-211ENST00000560983 SRSF10O75494 262 aaKnown RBP2.55□□□□□ -2
HERC1-211ENST00000560983 FADS2O95864 444 aaKnown RBP2.55□□□□□ -2
HERC1-211ENST00000560983 CYB5AP00167 134 aa2.55□□□□□ -2
HERC1-211ENST00000560983 PRH1P02810 166 aa2.55□□□□□ -2
HERC1-211ENST00000560983 LYNP07948 512 aa2.55□□□□□ -2
HERC1-211ENST00000560983 ALOX5APP20292 161 aa2.55□□□□□ -2
HERC1-211ENST00000560983 NPY1RP25929 384 aa2.55□□□□□ -2
HERC1-211ENST00000560983 BLVRAP53004 296 aa2.55□□□□□ -2
HERC1-211ENST00000560983 HCCSP53701 268 aa2.55□□□□□ -2
HERC1-211ENST00000560983 RHOGP84095 191 aa2.55□□□□□ -2
HERC1-211ENST00000560983 ATP5G2Q06055 141 aa2.55□□□□□ -2
HERC1-211ENST00000560983 PJVKQ0ZLH3 352 aa2.55□□□□□ -2
HERC1-211ENST00000560983 GAGE5Q13069 117 aa2.55□□□□□ -2
HERC1-211ENST00000560983 GAGE6Q13070 117 aa2.55□□□□□ -2
HERC1-211ENST00000560983 PDZK1IP1Q13113 114 aa2.55□□□□□ -2
HERC1-211ENST00000560983 STX3Q13277 289 aa2.55□□□□□ -2
HERC1-211ENST00000560983 EXOSC2Q13868 293 aaKnown RBP2.55□□□□□ -2
HERC1-211ENST00000560983 PSG5Q15238 335 aa2.55□□□□□ -2
HERC1-211ENST00000560983 CTF1Q16619 201 aa2.55□□□□□ -2
HERC1-211ENST00000560983 ZNF876PQ49A33 203 aa2.55□□□□□ -2
HERC1-211ENST00000560983 MORN3Q6PF18 240 aaPredicted RBP2.55□□□□□ -2
HERC1-211ENST00000560983 ZNF833PQ6ZTB9 187 aa2.55□□□□□ -2
HERC1-211ENST00000560983 CYP4Z1Q86W10 505 aa2.55□□□□□ -2
HERC1-211ENST00000560983 COMMD2Q86X83 199 aa2.55□□□□□ -2
HERC1-211ENST00000560983 TCEANCQ8N8B7 351 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms