RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 IRF2P14316 349 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 MAS1LP35410 378 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 THBS3P49746 956 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 FHITP49789 147 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 LOXL3P58215 753 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 SPCS3P61009 180 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 ERVK-16P61578 105 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 TMEM267Q0VDI3 215 aaPredicted RBP8.06□□□□□ -1.12
RTF1-206ENST00000560447 TMEM41BQ5BJD5 291 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 AVPI1Q5T686 147 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 ZNF788Q6ZQV5 615 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 HAPLN4Q86UW8 402 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 DOLPP1Q86YN1 238 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 ZNF808Q8N4W9 903 aaPredicted RBP8.06□□□□□ -1.12
RTF1-206ENST00000560447 OR10P1Q8NGE3 313 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 CLDND2Q8NHS1 167 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 DTD1Q8TEA8 209 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 R3HDM4Q96D70 268 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 ZNF251Q9BRH9 671 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 LRFN3Q9BTN0 628 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 GGACTQ9BVM4 153 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 GFOD1Q9NXC2 390 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 CISD1Q9NZ45 108 aaKnown RBP8.06□□□□□ -1.12
RTF1-206ENST00000560447 GNG12Q9UBI6 72 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 PSG11Q9UQ72 335 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 FBXO7Q9Y3I1 522 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 FREM2Q5SZK8 3169 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 A0A087WWC5 75 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 TRGV8A0A0C4DH27 118 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 IGHV3-64DA0A0J9YX35 117 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 KBTBD11-OT1A0A1B0GTJ5 212 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 LOC102723971A0A1B0GUV8 181 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 NKX6-3A6NJ46 265 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 MARCH11A6NNE9 402 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 B4DEV8 164 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 C17orf112F2Z3M2 114 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 H3BP45 60 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 RAMP3O60896 148 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 KRASP01116 189 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 IGHV1-46P01743 117 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 MT-ND4LP03901 98 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 SRP19P09132 144 aaKnown RBP8.05□□□□□ -1.12
RTF1-206ENST00000560447 NQO2P16083 231 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 G6PCP35575 357 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 ASCL1P50553 236 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 ATP5IP56385 69 aaPredicted RBP8.05□□□□□ -1.12
RTF1-206ENST00000560447 BRWD1-AS2P59051 145 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 RUNX1Q01196 453 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 MEF2CQ06413 473 aaPredicted RBP8.05□□□□□ -1.12
RTF1-206ENST00000560447 ZNF816Q0VGE8 651 aaPredicted RBP8.05□□□□□ -1.12
RTF1-206ENST00000560447 EDDM3AQ14507 147 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 POU2AF1Q16633 256 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 AWAT1Q58HT5 328 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 SPANXN5Q5MJ07 72 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 SLC35E3Q7Z769 313 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 ZNF429Q86V71 674 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 C1orf87Q8N0U7 546 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 OR4S2Q8NH73 311 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 UBALD1Q8TB05 177 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 SFT2D1Q8WV19 159 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 ABHD17AQ96GS6 310 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 OR4C12Q96R67 309 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 GCM1Q9NP62 436 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 CLN8Q9UBY8 286 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 MLXQ9UH92 298 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 ZNF292O60281 2723 aa8.05□□□□□ -1.12
RTF1-206ENST00000560447 A0A0G2JNJ9 132 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 C7orf77A4D0Y5 90 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 CXorf65A6NEN9 183 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 LINC00473A8K010 186 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 COLCA2A8K830 154 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 PMS2P5A8MQ11 134 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 K7ENP7 123 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 SPRY3O43610 288 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 ARG1P05089 322 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 HOXB4P17483 251 aaPredicted RBP8.04□□□□□ -1.12
RTF1-206ENST00000560447 UCNP55089 124 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 FAM27E3Q08E93 113 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 ARL16Q0P5N6 197 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 PNRC1Q12796 327 aaPredicted RBP8.04□□□□□ -1.12
RTF1-206ENST00000560447 ICAM4Q14773 271 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 IZUMO4Q1ZYL8 232 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 TMEM249Q2WGJ8 235 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 TMEM88Q6PEY1 159 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 RBMS3Q6XE24 437 aaKnown RBP8.04□□□□□ -1.12
RTF1-206ENST00000560447 CBLN2Q8IUK8 224 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 RPRMLQ8N4K4 120 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 DDB2Q92466 427 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 MALSU1Q96EH3 234 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 GAFA1Q96PS6 74 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 S1PR3Q99500 378 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 ABHD14AQ9BUJ0 271 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 IFI27L2Q9H2X8 130 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 SIRT7Q9NRC8 400 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 KCNIP2Q9NS61 270 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 RPRMQ9NS64 109 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 IDI2-AS1Q9NZ38 188 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 Q9UFV3 132 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 PRELID1Q9Y255 219 aa8.04□□□□□ -1.12
RTF1-206ENST00000560447 TP53TG5Q9Y2B4 290 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms