RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 COX5BP10606 129 aa11.58□□□□□ -0.55
TRAF3-208ENST00000560371 BSXQ3C1V8 233 aa11.58□□□□□ -0.55
TRAF3-208ENST00000560371 DNM1P46Q6ZS02 220 aa11.58□□□□□ -0.55
TRAF3-208ENST00000560371 TCTEX1D1Q8N7M0 179 aa11.58□□□□□ -0.55
TRAF3-208ENST00000560371 GUCD1Q96NT3 240 aa11.58□□□□□ -0.55
TRAF3-208ENST00000560371 RALYQ9UKM9 306 aaKnown RBP11.58□□□□□ -0.55
TRAF3-208ENST00000560371 C4orf51C9J302 202 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 SLC25A17O43808 307 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 EIF4E3Q8N5X7 224 aaKnown RBP11.58□□□□□ -0.56
TRAF3-208ENST00000560371 PAXXQ9BUH6 204 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 IDI2-AS1Q9NZ38 188 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 NAT8Q9UHE5 227 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 ANAPC1Q9H1A4 1944 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 A0A1W2PP11 408 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 H7C2G1 150 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 FAM210BQ96KR6 192 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 M0R3E3 92 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 MELTFP08582 738 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 FSTP19883 344 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 TCL1AP56279 114 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 RAXQ9Y2V3 346 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 RFPL3SP0C7P2 107 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 ADIPOQQ15848 244 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 TMEM78Q5T7P6 136 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 PRNTQ86SH4 94 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 LINC00469Q8N7U9 141 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 COMPP49747 757 aaPredicted RBP11.58□□□□□ -0.56
TRAF3-208ENST00000560371 DLL3Q9NYJ7 618 aa11.58□□□□□ -0.56
TRAF3-208ENST00000560371 IGKV3D-11A0A0A0MRZ8 115 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 CXCL3P19876 107 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 FAM106AQ4KMX7 169 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 TMEM255AQ5JRV8 349 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 OR2T10Q8NGZ9 312 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 DDB2Q92466 427 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 LPAR5Q9H1C0 372 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 IGLV1-36A0A0B4J1U3 117 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 RECKO95980 971 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 PF4P02776 101 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 RCC1P18754 421 aaPredicted RBP11.57□□□□□ -0.56
TRAF3-208ENST00000560371 RFLNBQ8N5W9 214 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 CLEC7AQ9BXN2 247 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 FAM27E3Q08E93 113 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 FAM24BQ8N5W8 94 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 MRAP2Q96G30 205 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 hCG_38984A0A1B0GV85 526 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 SELENOTP62341 195 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 IQCJQ1A5X6 159 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 IGF2P01344 180 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 DLX1P56177 255 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 APCDD1LQ8NCL9 501 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 OR2D3Q8NGH3 330 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 OR10C1Q96KK4 312 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 CCKARP32238 428 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 TCTAP57738 103 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 SRSF9Q13242 221 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRAF3-208ENST00000560371 VAX1Q5SQQ9 334 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 ANAPC16Q96DE5 110 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 OR4C12Q96R67 309 aa11.57□□□□□ -0.56
TRAF3-208ENST00000560371 H0Y980 276 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 ZNF703Q9H7S9 590 aaPredicted RBP11.56□□□□□ -0.56
TRAF3-208ENST00000560371 ZNF137PP52743 207 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 ZNF738Q8NE65 137 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 MIXL1Q9H2W2 232 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 SRSF10O75494 262 aaKnown RBP11.56□□□□□ -0.56
TRAF3-208ENST00000560371 CRISP2P16562 243 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 IRF3Q14653 427 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 FAM74A3Q4VXF1 159 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 LDLRAD3Q86YD5 345 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 OPN4Q9UHM6 478 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 KLK13Q9UKR3 277 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 TMSB15BA0A087X1C1 80 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 CSRP1P21291 193 aaKnown RBP11.56□□□□□ -0.56
TRAF3-208ENST00000560371 ERVS71-1P61550 626 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 ZNF841Q6ZN19 808 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 OVCH2Q7RTZ1 564 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 AMELYQ99218 206 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 CHCHD2Q9Y6H1 151 aaPredicted RBP11.56□□□□□ -0.56
TRAF3-208ENST00000560371 TMEM56-RWDD3S4R434 201 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 PAGE4O60829 102 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 KIR2DL2P43627 348 aaPredicted RBP11.56□□□□□ -0.56
TRAF3-208ENST00000560371 PPOXP50336 477 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 NUBP1P53384 320 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 FAM168AQ92567 244 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 WNT5BQ9H1J7 359 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 V9GYH0 126 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 PTPN13Q12923 2485 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 CD1AP06126 327 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 MFAP4P55083 255 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 GBGT1Q8N5D6 347 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 OR9G1Q8NH87 305 aa11.56□□□□□ -0.56
TRAF3-208ENST00000560371 CTXND1A0A1B0GTU2 59 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 ZP3P21754 424 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 PMS2P11Q13670 270 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 CLRN3Q8NCR9 226 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 ACACBO00763 2458 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 A0A0G2JMZ2 1700 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 LRRC37A2A6NM11 1700 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 FAM90A10PA6NDY2 464 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 FAM90A18PA6NE21 464 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 FAM90A16PA6NEW6 464 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms