RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 SFT2D2O95562 160 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 SULT1A3P0DMM9 295 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 SULT1A4P0DMN0 295 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 VAMP1P23763 118 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 CEACAM6P40199 344 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 RND3P61587 244 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 KLRD1Q13241 179 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 NSUN5P1Q3KNT7 163 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 PNKDQ8N490 385 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 PRR18Q8N4B5 295 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 ADAD2Q8NCV1 583 aaKnown RBP16.55■□□□□ 0.24
PSEN1-225ENST00000560005 OR10A7Q8NGE5 316 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 MITD1Q8WV92 249 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 EDARADDQ8WWZ3 215 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 ZNF221Q9UK13 617 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 JPT1Q9UK76 154 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 LINC00312Q9Y6C7 94 aa16.55■□□□□ 0.24
PSEN1-225ENST00000560005 TRAV39A0A0B4J263 110 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 A0A1B0GW55 424 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 B3GALNT1O75752 331 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 DUX4L2P0CJ85 424 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 DUX4L3P0CJ86 424 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 DUX4L4P0CJ87 422 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 DUX4L5P0CJ88 424 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 DUX4L6P0CJ89 424 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 DUX4L7P0CJ90 424 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 CD34P28906 385 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 PIGPP57054 158 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 PPP1R1AQ13522 171 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 FCN2Q15485 313 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 MSMO1Q15800 293 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 LIN54Q6MZP7 749 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 DUX4L9Q6RFH8 374 aaPredicted RBP16.54■□□□□ 0.24
PSEN1-225ENST00000560005 KCTD9Q7L273 389 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 ZBTB34Q8NCN2 500 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 LY6G5BQ8NDX9 201 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 OR10V1Q8NGI7 309 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 OR4C13Q8NGP0 309 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 OR1L1Q8NH94 360 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 COQ8AQ8NI60 647 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 GAL3ST2Q9H3Q3 398 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 RDH8Q9NYR8 311 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 DUX4Q9UBX2 424 aa16.54■□□□□ 0.24
PSEN1-225ENST00000560005 RBM7Q9Y580 266 aaKnown RBP16.54■□□□□ 0.24
PSEN1-225ENST00000560005 TRBV23-1A0A0A0MS06 115 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 KBTBD11-OT1A0A1B0GTJ5 212 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 C15orf65H3BRN8 121 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 H3BUX3 64 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 F2RL2O00254 374 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 CGB3P0DN86 165 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 CGB7P0DN87 165 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 SAA4P35542 130 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 LY6G6FQ5SQ64 297 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 TPRX1Q8N7U7 411 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 OR2AK2Q8NG84 335 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 OR52M1Q8NGK5 317 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 OR2T6Q8NHC8 308 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 SECTM1Q8WVN6 248 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 LINC00574Q9H8X3 128 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 OR2S2Q9NQN1 319 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 CALYQ9NYX4 217 aa16.53■□□□□ 0.24
PSEN1-225ENST00000560005 A0A1W2PPH5 198 aa16.52■□□□□ 0.24
PSEN1-225ENST00000560005 CRYM-AS1A6NIL9 109 aa16.52■□□□□ 0.24
PSEN1-225ENST00000560005 ITGB1BP1O14713 200 aa16.52■□□□□ 0.24
PSEN1-225ENST00000560005 YPEL1O60688 119 aa16.52■□□□□ 0.24
PSEN1-225ENST00000560005 RPL31P62899 125 aaKnown RBP16.52■□□□□ 0.24
PSEN1-225ENST00000560005 LY6EQ16553 131 aa16.52■□□□□ 0.24
PSEN1-225ENST00000560005 TCTE3Q8IZS6 198 aa16.52■□□□□ 0.24
PSEN1-225ENST00000560005 OR52B4Q8NGK2 314 aa16.52■□□□□ 0.24
PSEN1-225ENST00000560005 RTN4IP1Q8WWV3 396 aaPredicted RBP16.52■□□□□ 0.24
PSEN1-225ENST00000560005 TMEM230Q96A57 120 aa16.52■□□□□ 0.24
PSEN1-225ENST00000560005 GALNT14Q96FL9 552 aa16.52■□□□□ 0.24
PSEN1-225ENST00000560005 ST6GAL2Q96JF0 529 aa16.52■□□□□ 0.24
PSEN1-225ENST00000560005 YPEL2Q96QA6 119 aa16.52■□□□□ 0.24
PSEN1-225ENST00000560005 SLC2A9Q9NRM0 540 aa16.52■□□□□ 0.24
PSEN1-225ENST00000560005 SELLP14151 372 aa16.51■□□□□ 0.23
PSEN1-225ENST00000560005 HLA-GP17693 338 aa16.51■□□□□ 0.23
PSEN1-225ENST00000560005 GNRHRP30968 328 aa16.51■□□□□ 0.23
PSEN1-225ENST00000560005 SRPXP78539 464 aa16.51■□□□□ 0.23
PSEN1-225ENST00000560005 Q8N7P7 452 aa16.51■□□□□ 0.23
PSEN1-225ENST00000560005 BVESQ8NE79 360 aa16.51■□□□□ 0.23
PSEN1-225ENST00000560005 R3HDM4Q96D70 268 aa16.51■□□□□ 0.23
PSEN1-225ENST00000560005 NAA60Q9H7X0 242 aa16.51■□□□□ 0.23
PSEN1-225ENST00000560005 OR1A1Q9P1Q5 309 aa16.51■□□□□ 0.23
PSEN1-225ENST00000560005 GNG12Q9UBI6 72 aa16.51■□□□□ 0.23
PSEN1-225ENST00000560005 MGAT4CQ9UBM8 478 aa16.51■□□□□ 0.23
PSEN1-225ENST00000560005 PI3P19957 117 aa16.5■□□□□ 0.23
PSEN1-225ENST00000560005 SSTR5P35346 364 aa16.5■□□□□ 0.23
PSEN1-225ENST00000560005 CD83Q01151 205 aa16.5■□□□□ 0.23
PSEN1-225ENST00000560005 UXS1Q8NBZ7 420 aa16.5■□□□□ 0.23
PSEN1-225ENST00000560005 BEND2Q8NDZ0 799 aa16.5■□□□□ 0.23
PSEN1-225ENST00000560005 CASTOR1Q8WTX7 329 aa16.5■□□□□ 0.23
PSEN1-225ENST00000560005 TNFRSF14Q92956 283 aa16.5■□□□□ 0.23
PSEN1-225ENST00000560005 SSX3Q99909 188 aa16.5■□□□□ 0.23
PSEN1-225ENST00000560005 ZNF436Q9C0F3 470 aaPredicted RBP16.5■□□□□ 0.23
PSEN1-225ENST00000560005 K7EIL1 84 aa16.49■□□□□ 0.23
PSEN1-225ENST00000560005 MPPED1O15442 326 aa16.49■□□□□ 0.23
PSEN1-225ENST00000560005 FBXO24O75426 580 aa16.49■□□□□ 0.23
PSEN1-225ENST00000560005 GIPP09681 153 aaPredicted RBP16.49■□□□□ 0.23
PSEN1-225ENST00000560005 RAB7AP51149 207 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms