RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 DCTN2Q13561 401 aaKnown RBP15.88■□□□□ 0.13
CHRNA3-207ENST00000559941 AKIRIN2Q53H80 203 aa15.88■□□□□ 0.13
CHRNA3-207ENST00000559941 ASPHD1Q5U4P2 390 aa15.88■□□□□ 0.13
CHRNA3-207ENST00000559941 OR10J5Q8NHC4 309 aa15.88■□□□□ 0.13
CHRNA3-207ENST00000559941 OR5B12Q96R08 314 aa15.88■□□□□ 0.13
CHRNA3-207ENST00000559941 CLCC1Q96S66 551 aa15.88■□□□□ 0.13
CHRNA3-207ENST00000559941 YTHDF1Q9BYJ9 559 aaKnown RBP15.88■□□□□ 0.13
CHRNA3-207ENST00000559941 SCOCQ9UIL1 159 aa15.88■□□□□ 0.13
CHRNA3-207ENST00000559941 A3GALT2U3KPV4 340 aa15.88■□□□□ 0.13
CHRNA3-207ENST00000559941 SORL1Q92673 2214 aa15.88■□□□□ 0.13
CHRNA3-207ENST00000559941 A0A075B6Q4 140 aa15.87■□□□□ 0.13
CHRNA3-207ENST00000559941 M0R1X1 148 aa15.87■□□□□ 0.13
CHRNA3-207ENST00000559941 OR8U9P0C7N5 309 aa15.87■□□□□ 0.13
CHRNA3-207ENST00000559941 SNRPBP14678 240 aaKnown RBP15.87■□□□□ 0.13
CHRNA3-207ENST00000559941 SRSF7Q16629 238 aaKnown RBP eCLIP15.87■□□□□ 0.13
CHRNA3-207ENST00000559941 Q6ZS49 121 aa15.87■□□□□ 0.13
CHRNA3-207ENST00000559941 PPP1R27Q86WC6 154 aa15.87■□□□□ 0.13
CHRNA3-207ENST00000559941 ABHD5Q8WTS1 349 aa15.87■□□□□ 0.13
CHRNA3-207ENST00000559941 FLYWCH2Q96CP2 140 aaKnown RBP15.87■□□□□ 0.13
CHRNA3-207ENST00000559941 B9D2Q9BPU9 175 aa15.87■□□□□ 0.13
CHRNA3-207ENST00000559941 SLC35D1Q9NTN3 355 aa15.87■□□□□ 0.13
CHRNA3-207ENST00000559941 TXNL4BQ9NX01 149 aaKnown RBP15.87■□□□□ 0.13
CHRNA3-207ENST00000559941 ZNF230Q9UIE0 474 aaPredicted RBP15.87■□□□□ 0.13
CHRNA3-207ENST00000559941 CA2P00918 260 aa15.86■□□□□ 0.13
CHRNA3-207ENST00000559941 PSMB9P28065 219 aa15.86■□□□□ 0.13
CHRNA3-207ENST00000559941 PYHIN1Q6K0P9 492 aa15.86■□□□□ 0.13
CHRNA3-207ENST00000559941 MAFIPQ8WZ33 124 aa15.86■□□□□ 0.13
CHRNA3-207ENST00000559941 FCGR1BQ92637 280 aa15.86■□□□□ 0.13
CHRNA3-207ENST00000559941 FAM103A1Q9BTL3 118 aaKnown RBP15.86■□□□□ 0.13
CHRNA3-207ENST00000559941 CENPOQ9BU64 300 aa15.86■□□□□ 0.13
CHRNA3-207ENST00000559941 ATG5Q9H1Y0 275 aa15.86■□□□□ 0.13
CHRNA3-207ENST00000559941 OR2D2Q9H210 308 aa15.86■□□□□ 0.13
CHRNA3-207ENST00000559941 Q9H521 79 aa15.86■□□□□ 0.13
CHRNA3-207ENST00000559941 SDHAF2Q9NX18 166 aa15.86■□□□□ 0.13
CHRNA3-207ENST00000559941 NOTOA8MTQ0 251 aa15.85■□□□□ 0.13
CHRNA3-207ENST00000559941 TALDO1P37837 337 aa15.85■□□□□ 0.13
CHRNA3-207ENST00000559941 CD69Q07108 199 aa15.85■□□□□ 0.13
CHRNA3-207ENST00000559941 ARFRP1Q13795 201 aa15.85■□□□□ 0.13
CHRNA3-207ENST00000559941 ARL6IP1Q15041 203 aa15.85■□□□□ 0.13
CHRNA3-207ENST00000559941 ZNF260Q3ZCT1 412 aa15.85■□□□□ 0.13
CHRNA3-207ENST00000559941 ACTBL2Q562R1 376 aa15.85■□□□□ 0.13
CHRNA3-207ENST00000559941 VAX1Q5SQQ9 334 aa15.85■□□□□ 0.13
CHRNA3-207ENST00000559941 UNQ5815/PRO19632Q6UWF5 114 aa15.85■□□□□ 0.13
CHRNA3-207ENST00000559941 LFNGQ8NES3 379 aa15.85■□□□□ 0.13
CHRNA3-207ENST00000559941 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.85■□□□□ 0.13
CHRNA3-207ENST00000559941 STUB1Q9UNE7 303 aa15.85■□□□□ 0.13
CHRNA3-207ENST00000559941 SMIM30A4D0T7 59 aa15.84■□□□□ 0.13
CHRNA3-207ENST00000559941 SLC25A17O43808 307 aa15.84■□□□□ 0.13
CHRNA3-207ENST00000559941 LGALS7P47929 136 aa15.84■□□□□ 0.13
CHRNA3-207ENST00000559941 INSL3P51460 131 aa15.84■□□□□ 0.13
CHRNA3-207ENST00000559941 TAGLNQ01995 201 aaKnown RBP15.84■□□□□ 0.13
CHRNA3-207ENST00000559941 TPRA1Q86W33 373 aa15.84■□□□□ 0.13
CHRNA3-207ENST00000559941 CASTOR1Q8WTX7 329 aa15.84■□□□□ 0.13
CHRNA3-207ENST00000559941 ARPC1AQ92747 370 aa15.84■□□□□ 0.13
CHRNA3-207ENST00000559941 C5orf30Q96GV9 206 aa15.84■□□□□ 0.13
CHRNA3-207ENST00000559941 ALX4Q9H161 411 aaPredicted RBP15.84■□□□□ 0.13
CHRNA3-207ENST00000559941 TPSG1Q9NRR2 321 aa15.84■□□□□ 0.13
CHRNA3-207ENST00000559941 IGLV2-23P01705 113 aa15.83■□□□□ 0.12
CHRNA3-207ENST00000559941 LGALS1P09382 135 aaKnown RBP15.83■□□□□ 0.12
CHRNA3-207ENST00000559941 DTYMKP23919 212 aa15.83■□□□□ 0.12
CHRNA3-207ENST00000559941 ECI1P42126 302 aa15.83■□□□□ 0.12
CHRNA3-207ENST00000559941 CDNFQ49AH0 187 aa15.83■□□□□ 0.12
CHRNA3-207ENST00000559941 C11orf87Q6NUJ2 197 aa15.83■□□□□ 0.12
CHRNA3-207ENST00000559941 DCUN1D4Q92564 292 aa15.83■□□□□ 0.12
CHRNA3-207ENST00000559941 PRR25Q96S07 402 aa15.83■□□□□ 0.12
CHRNA3-207ENST00000559941 GINS4Q9BRT9 223 aa15.83■□□□□ 0.12
CHRNA3-207ENST00000559941 ELF5Q9UKW6 265 aaPredicted RBP15.83■□□□□ 0.12
CHRNA3-207ENST00000559941 SSR3Q9UNL2 185 aa15.83■□□□□ 0.12
CHRNA3-207ENST00000559941 LSM4Q9Y4Z0 139 aaKnown RBP15.83■□□□□ 0.12
CHRNA3-207ENST00000559941 RBM7Q9Y580 266 aaKnown RBP15.83■□□□□ 0.12
CHRNA3-207ENST00000559941 TNCP24821 2201 aa15.83■□□□□ 0.12
CHRNA3-207ENST00000559941 IGKV1D-8A0A087WSZ0 117 aa15.82■□□□□ 0.12
CHRNA3-207ENST00000559941 LINC01619G3V211 115 aa15.82■□□□□ 0.12
CHRNA3-207ENST00000559941 OVOL1O14753 267 aa15.82■□□□□ 0.12
CHRNA3-207ENST00000559941 ARPC1BO15143 372 aaKnown RBP15.82■□□□□ 0.12
CHRNA3-207ENST00000559941 CRYGBP07316 175 aa15.82■□□□□ 0.12
CHRNA3-207ENST00000559941 CD40LGP29965 261 aa15.82■□□□□ 0.12
CHRNA3-207ENST00000559941 FXYD3Q14802 87 aa15.82■□□□□ 0.12
CHRNA3-207ENST00000559941 TMEM177Q53S58 311 aa15.82■□□□□ 0.12
CHRNA3-207ENST00000559941 H1FOOQ8IZA3 346 aaPredicted RBP15.82■□□□□ 0.12
CHRNA3-207ENST00000559941 SLA2Q9H6Q3 261 aa15.82■□□□□ 0.12
CHRNA3-207ENST00000559941 RRASP10301 218 aa15.81■□□□□ 0.12
CHRNA3-207ENST00000559941 SSBP2P81877 361 aaPredicted RBP15.81■□□□□ 0.12
CHRNA3-207ENST00000559941 HACD4Q5VWC8 232 aa15.81■□□□□ 0.12
CHRNA3-207ENST00000559941 ZNF773Q6PK81 442 aa15.81■□□□□ 0.12
CHRNA3-207ENST00000559941 BVESQ8NE79 360 aa15.81■□□□□ 0.12
CHRNA3-207ENST00000559941 DLX4Q92988 240 aaPredicted RBP15.81■□□□□ 0.12
CHRNA3-207ENST00000559941 RHOVQ96L33 236 aa15.81■□□□□ 0.12
CHRNA3-207ENST00000559941 MS4A10Q96PG2 267 aa15.81■□□□□ 0.12
CHRNA3-207ENST00000559941 DAPK2Q9UIK4 370 aa15.81■□□□□ 0.12
CHRNA3-207ENST00000559941 IGHV4OR15-8A0A075B7B6 117 aa15.8■□□□□ 0.12
CHRNA3-207ENST00000559941 A0A087WW49 117 aa15.8■□□□□ 0.12
CHRNA3-207ENST00000559941 SLURP1P55000 103 aa15.8■□□□□ 0.12
CHRNA3-207ENST00000559941 TPPP2P59282 170 aa15.8■□□□□ 0.12
CHRNA3-207ENST00000559941 CBX3Q13185 183 aa15.8■□□□□ 0.12
CHRNA3-207ENST00000559941 ZNF429Q86V71 674 aa15.8■□□□□ 0.12
CHRNA3-207ENST00000559941 GRPEL2Q8TAA5 225 aa15.8■□□□□ 0.12
CHRNA3-207ENST00000559941 ADTRPQ96IZ2 230 aa15.8■□□□□ 0.12
CHRNA3-207ENST00000559941 HARBI1Q96MB7 349 aa15.8■□□□□ 0.12
CHRNA3-207ENST00000559941 OR51E2Q9H255 320 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms