RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 CD81P60033 236 aa12.31□□□□□ -0.44
CDC42BPB-205ENST00000559245 HLA-DRB3P79483 266 aa12.31□□□□□ -0.44
CDC42BPB-205ENST00000559245 DYRK1AQ13627 763 aa12.31□□□□□ -0.44
CDC42BPB-205ENST00000559245 BVESQ8NE79 360 aa12.31□□□□□ -0.44
CDC42BPB-205ENST00000559245 OR2K2Q8NGT1 345 aa12.31□□□□□ -0.44
CDC42BPB-205ENST00000559245 THRSPQ92748 146 aa12.31□□□□□ -0.44
CDC42BPB-205ENST00000559245 PTX4Q96A99 478 aa12.31□□□□□ -0.44
CDC42BPB-205ENST00000559245 TM2D1Q9BX74 207 aa12.31□□□□□ -0.44
CDC42BPB-205ENST00000559245 KCNK15Q9H427 330 aa12.31□□□□□ -0.44
CDC42BPB-205ENST00000559245 PLEKHJ1Q9NW61 149 aa12.31□□□□□ -0.44
CDC42BPB-205ENST00000559245 ZNF221Q9UK13 617 aa12.31□□□□□ -0.44
CDC42BPB-205ENST00000559245 TRBV6-6A0A0A6YYG2 114 aa12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 TPPPO94811 219 aa12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 OR2A4O95047 310 aa12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 IGLV2-23P01705 113 aa12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 CD1AP06126 327 aa12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 LGALS7P47929 136 aa12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 UNC119Q13432 240 aa12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 KCNG3Q8TAE7 436 aa12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 USMG5Q96IX5 58 aa12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 NEURL2Q9BR09 285 aa12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 HDHD3Q9BSH5 251 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 RIMS4Q9H426 269 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 SLC35D1Q9NTN3 355 aa12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 SMPD3Q9NY59 655 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 COA4Q9NYJ1 87 aa12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 PEMTQ9UBM1 199 aa12.3□□□□□ -0.44
CDC42BPB-205ENST00000559245 A0A0A6YYD4 124 aa12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 RBMY1BA6NDE4 496 aaKnown RBP12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 RBMY1EA6NEQ0 496 aaKnown RBP12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 CRYGBP07316 175 aa12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 SCTP09683 121 aa12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 RBMY1DP0C7P1 496 aaKnown RBP12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 ST3GAL4Q11206 333 aa12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 C1orf100Q5SVJ3 147 aa12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 RNLSQ5VYX0 342 aa12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 LAX1Q8IWV1 398 aa12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 GGHQ92820 318 aa12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 SNAPC3Q92966 411 aa12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 VCX3BQ9H321 246 aa12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 SLC2A8Q9NY64 477 aa12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 AK3Q9UIJ7 227 aa12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 MGAT4AQ9UM21 535 aa12.29□□□□□ -0.44
CDC42BPB-205ENST00000559245 A0A0B4J203 849 aa12.28□□□□□ -0.44
CDC42BPB-205ENST00000559245 EFCAB10A6NFE3 127 aa12.28□□□□□ -0.44
CDC42BPB-205ENST00000559245 TMEM14DPA8MWL7 114 aa12.28□□□□□ -0.44
CDC42BPB-205ENST00000559245 M0R1X1 148 aa12.28□□□□□ -0.44
CDC42BPB-205ENST00000559245 RBMXL2O75526 392 aaKnown RBP12.28□□□□□ -0.44
CDC42BPB-205ENST00000559245 CD7P09564 240 aa12.28□□□□□ -0.44
CDC42BPB-205ENST00000559245 APELAP0DMC3 54 aa12.28□□□□□ -0.44
CDC42BPB-205ENST00000559245 INSL4Q14641 139 aa12.28□□□□□ -0.44
CDC42BPB-205ENST00000559245 CD300EQ496F6 205 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPB-205ENST00000559245 GLT8D1Q68CQ7 371 aa12.28□□□□□ -0.44
CDC42BPB-205ENST00000559245 LRRTM1Q86UE6 522 aa12.28□□□□□ -0.44
CDC42BPB-205ENST00000559245 DEFB125Q8N687 156 aa12.28□□□□□ -0.44
CDC42BPB-205ENST00000559245 WFDC10AQ9H1F0 79 aa12.28□□□□□ -0.44
CDC42BPB-205ENST00000559245 ZNF785A8K8V0 405 aa12.27□□□□□ -0.45
CDC42BPB-205ENST00000559245 SOCS1O15524 211 aa12.27□□□□□ -0.45
CDC42BPB-205ENST00000559245 AIREO43918 545 aa12.27□□□□□ -0.45
CDC42BPB-205ENST00000559245 WNT4P56705 351 aa12.27□□□□□ -0.45
CDC42BPB-205ENST00000559245 QRFPP83859 136 aa12.27□□□□□ -0.45
CDC42BPB-205ENST00000559245 RBM48Q5RL73 367 aaKnown RBP12.27□□□□□ -0.45
CDC42BPB-205ENST00000559245 LINC00476Q8WZB0 136 aa12.27□□□□□ -0.45
CDC42BPB-205ENST00000559245 HARBI1Q96MB7 349 aa12.27□□□□□ -0.45
CDC42BPB-205ENST00000559245 PHB2Q99623 299 aa12.27□□□□□ -0.45
CDC42BPB-205ENST00000559245 SRD5A3Q9H8P0 318 aa12.27□□□□□ -0.45
CDC42BPB-205ENST00000559245 Q9N2K0 584 aa12.27□□□□□ -0.45
CDC42BPB-205ENST00000559245 RDH8Q9NYR8 311 aa12.27□□□□□ -0.45
CDC42BPB-205ENST00000559245 IGKV1-6A0A0C4DH72 117 aa12.26□□□□□ -0.45
CDC42BPB-205ENST00000559245 BMPR1BO00238 502 aa12.26□□□□□ -0.45
CDC42BPB-205ENST00000559245 MYL12BO14950 172 aa12.26□□□□□ -0.45
CDC42BPB-205ENST00000559245 ACSM3Q53FZ2 586 aa12.26□□□□□ -0.45
CDC42BPB-205ENST00000559245 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.26□□□□□ -0.45
CDC42BPB-205ENST00000559245 ADAD2Q8NCV1 583 aaKnown RBP12.26□□□□□ -0.45
CDC42BPB-205ENST00000559245 CYGBQ8WWM9 190 aa12.26□□□□□ -0.45
CDC42BPB-205ENST00000559245 PHYHIPQ92561 330 aa12.26□□□□□ -0.45
CDC42BPB-205ENST00000559245 LPAR5Q9H1C0 372 aa12.26□□□□□ -0.45
CDC42BPB-205ENST00000559245 MSGN1A6NI15 193 aa12.25□□□□□ -0.45
CDC42BPB-205ENST00000559245 SRRM4A7MD48 611 aaKnown RBP12.25□□□□□ -0.45
CDC42BPB-205ENST00000559245 OR11H12B2RN74 326 aa12.25□□□□□ -0.45
CDC42BPB-205ENST00000559245 SHOXO15266 292 aa12.25□□□□□ -0.45
CDC42BPB-205ENST00000559245 BPNT1O95861 308 aa12.25□□□□□ -0.45
CDC42BPB-205ENST00000559245 MRGPRG-AS1Q2M3A8 158 aa12.25□□□□□ -0.45
CDC42BPB-205ENST00000559245 TTC23Q5W5X9 447 aa12.25□□□□□ -0.45
CDC42BPB-205ENST00000559245 SETD9Q8NE22 299 aa12.25□□□□□ -0.45
CDC42BPB-205ENST00000559245 DYNLRB2Q8TF09 96 aa12.25□□□□□ -0.45
CDC42BPB-205ENST00000559245 URM1Q9BTM9 101 aaKnown RBP12.25□□□□□ -0.45
CDC42BPB-205ENST00000559245 VCXQ9H320 206 aa12.25□□□□□ -0.45
CDC42BPB-205ENST00000559245 AKIP1Q9NQ31 210 aa12.25□□□□□ -0.45
CDC42BPB-205ENST00000559245 C12orf4Q9NQ89 552 aa12.25□□□□□ -0.45
CDC42BPB-205ENST00000559245 HSF4Q9ULV5 492 aa12.25□□□□□ -0.45
CDC42BPB-205ENST00000559245 KMT2AQ03164 3969 aa12.25□□□□□ -0.45
CDC42BPB-205ENST00000559245 OR9G9P0C7N8 305 aa12.24□□□□□ -0.45
CDC42BPB-205ENST00000559245 SRMP19623 302 aa12.24□□□□□ -0.45
CDC42BPB-205ENST00000559245 HSPA13P48723 471 aa12.24□□□□□ -0.45
CDC42BPB-205ENST00000559245 RHOGP84095 191 aa12.24□□□□□ -0.45
CDC42BPB-205ENST00000559245 CBX3Q13185 183 aa12.24□□□□□ -0.45
CDC42BPB-205ENST00000559245 EXOSC2Q13868 293 aaKnown RBP12.24□□□□□ -0.45
CDC42BPB-205ENST00000559245 GUCA2BQ16661 112 aa12.24□□□□□ -0.45
CDC42BPB-205ENST00000559245 DEFB114Q30KQ6 69 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms