RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 LMX1AQ8TE12 382 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 CHMP6Q96FZ7 201 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 ACY3Q96HD9 319 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 CCDC42Q96M95 316 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 MED28Q9H204 178 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 LRRC19Q9H756 370 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 C3orf18Q9UK00 162 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 DKKL1Q9UK85 242 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 WASHC3Q9Y3C0 194 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 FIS1Q9Y3D6 152 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 ALG5Q9Y673 324 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 NPATQ14207 1427 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 TENM1Q9UKZ4 2725 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 GPR98Q8WXG9 6306 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 EVC2Q86UK5 1308 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 PLB1Q6P1J6 1458 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 COL18A1P39060 1754 aa1.11□□□□□ -2.23
VPS13C-207ENST00000558919 TRGV4A0A0C4DH28 118 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 LOC102725191A0A1B0GVB3 256 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 TMEM210A6NLX4 147 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 C17orf98A8MV24 154 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 A8MWP6 167 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 MRASO14807 208 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 ATP5HO75947 161 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 LYPLA2O95372 231 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 RPS17P08708 135 aaKnown RBP1.1□□□□□ -2.23
VPS13C-207ENST00000558919 ARL14EPLP0DKL9 152 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 IGHV3-30-3P0DP02 117 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 NEFHP12036 1026 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 UCHL3P15374 230 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 CD36P16671 472 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 GZMHP20718 246 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 CDK2P24941 298 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 CCR7P32248 378 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 HSPA9P38646 679 aaKnown RBP1.1□□□□□ -2.23
VPS13C-207ENST00000558919 SLCO1A2P46721 670 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 SNAP25P60880 206 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 HLA-DRB3P79483 266 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 PSG4Q00888 419 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 FABP5Q01469 135 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 TMEM267Q0VDI3 215 aaPredicted RBP1.1□□□□□ -2.23
VPS13C-207ENST00000558919 STX5Q13190 355 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 GNA13Q14344 377 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 PDGFRLQ15198 375 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 RSU1Q15404 277 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 BATFQ16520 125 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 TMEM176BQ3YBM2 270 aaPredicted RBP1.1□□□□□ -2.23
VPS13C-207ENST00000558919 ACSBG2Q5FVE4 666 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 SAPCD1Q5SSQ6 148 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 C1orf195Q5TG92 126 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 C8orf74Q6P047 294 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 SDIM1Q6ZPB5 146 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 TRAPPC5Q8IUR0 188 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 GID4Q8IVV7 300 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 MSRB3Q8IXL7 192 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 TMEM161BQ8NDZ6 487 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 OR2V1Q8NHB1 315 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 JOSD2Q8TAC2 188 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 C16orf78Q8WTQ4 265 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 Q8WTZ3 238 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 EEF1AKMT1Q8WVE0 214 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 OPTNQ96CV9 577 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 TMA16Q96EY4 203 aaKnown RBP1.1□□□□□ -2.23
VPS13C-207ENST00000558919 SLC35G5Q96KT7 338 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 C1QTNF6Q9BXI9 259 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 OR51V1Q9H2C8 321 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 PSTPIP2Q9H939 334 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 HES4Q9HCC6 221 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 FKBP14Q9NWM8 211 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 TAS2R9Q9NYW1 312 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 LSM5Q9Y4Y9 91 aaKnown RBP1.1□□□□□ -2.23
VPS13C-207ENST00000558919 OR51B4Q9Y5P0 310 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 HSPE1-MOB4S4R3N1 261 aa1.1□□□□□ -2.23
VPS13C-207ENST00000558919 NAV1Q8NEY1 1877 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 ARHGAP32A7KAX9 2087 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 MPDZO75970 2070 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 IGSF23A1L1A6 192 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 LINC00862A6NCI5 91 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 TMEM114B3SHH9 223 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 IFNA16P05015 189 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 P0DMU3 169 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 FAM231AP0DMU4 169 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 FAM231CP0DMU5 169 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 HIST1H1EP10412 219 aaKnown RBP1.09□□□□□ -2.23
VPS13C-207ENST00000558919 CA7P43166 264 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 HAAOP46952 286 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 OMPP47874 163 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 TMEM33P57088 247 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 AP3S2P59780 193 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 NAA20P61599 178 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 RPS24P62847 133 aaKnown RBP1.09□□□□□ -2.23
VPS13C-207ENST00000558919 HERVK_113P63121 156 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 CTAG1AP78358 180 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 BASP1P80723 227 aaKnown RBP1.09□□□□□ -2.23
VPS13C-207ENST00000558919 BSPH1Q075Z2 132 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 JOSD1Q15040 202 aaPredicted RBP1.09□□□□□ -2.23
VPS13C-207ENST00000558919 HIST2H3PS2Q5TEC6 136 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 FAM78BQ5VT40 261 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 OR10K2Q6IF99 312 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 SPOPLQ6IQ16 392 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms