RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 SEC11CQ9BY50 192 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 LYRM2Q9NU23 88 aaPredicted RBP6.38□□□□□ -1.39
LRRC28-211ENST00000558890 TMEM106BQ9NUM4 274 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 OR1A1Q9P1Q5 309 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 OR14J1Q9UGF5 321 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 KPTNQ9Y664 436 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 DYSFO75923 2080 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 JMJD1CQ15652 2540 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 TRAV38-1A0A0B4J264 116 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 LOC105371267A0A1B0GV96 52 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 FAM24AA6NFZ4 105 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 OOEPA6NGQ2 149 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 UMAD1C9J7I0 102 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 RNASEK-C17orf49H0YIS7 233 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 H0YL77 283 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 TMEM178BH3BS89 294 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 TRIM77I1YAP6 450 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 DFFBO76075 338 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 SPP1P10451 314 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 DAOP14920 347 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 EPHA1P21709 976 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 IL2RGP31785 369 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 PDLIM4P50479 330 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 DVL1P1P54792 670 aaPredicted RBP6.37□□□□□ -1.39
LRRC28-211ENST00000558890 CCL8P80075 99 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 AKR1C1Q04828 323 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 CATR1Q13166 79 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 SLC35E4Q6ICL7 350 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 TGIF2LYQ8IUE0 185 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 LURAP1LQ8IV03 231 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 ZCCHC24Q8N2G6 241 aaKnown RBP6.37□□□□□ -1.39
LRRC28-211ENST00000558890 PRR18Q8N4B5 295 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 GCSAMQ8N6F7 178 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 TMEM252Q8N6L7 170 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 HSD17B11Q8NBQ5 300 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 ZBTB34Q8NCN2 500 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 CLRN3Q8NCR9 226 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 PPP1R35Q8TAP8 253 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 RAB1CQ92928 201 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 LSM10Q969L4 123 aaKnown RBP6.37□□□□□ -1.39
LRRC28-211ENST00000558890 GNPNAT1Q96EK6 184 aaPredicted RBP6.37□□□□□ -1.39
LRRC28-211ENST00000558890 RAB40CQ96S21 281 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 C11orf1Q9H5F2 150 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 TMEM231Q9H6L2 316 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 C19orf12Q9NSK7 152 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 MBNL3Q9NUK0 354 aaKnown RBP6.37□□□□□ -1.39
LRRC28-211ENST00000558890 UQCC1Q9NVA1 299 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 KAAG1Q9UBP8 84 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 WIPI2Q9Y4P8 454 aa6.37□□□□□ -1.39
LRRC28-211ENST00000558890 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.37□□□□□ -1.397e-8■■■□□ 16.4
LRRC28-211ENST00000558890 HIVEP2P31629 2446 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 IGSF23A1L1A6 192 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.36□□□□□ -1.39
LRRC28-211ENST00000558890 DNASE2O00115 360 aaPredicted RBP6.36□□□□□ -1.39
LRRC28-211ENST00000558890 AGPAT2O15120 278 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 IFNA5P01569 189 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 SFTA3P0C7M3 94 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 OR8U9P0C7N5 309 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 PSG2P11465 335 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 SLC25A16P16260 332 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 LMO1P25800 156 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 CD80P33681 288 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 RAB2AP61019 212 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 ID3Q02535 119 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 NHLH2Q02577 135 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 CLINT1Q14677 625 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 MSMO1Q15800 293 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 MIDNQ504T8 468 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 C4orf48Q5BLP8 95 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 CXorf66Q5JRM2 361 aaPredicted RBP6.36□□□□□ -1.39
LRRC28-211ENST00000558890 C10orf91Q5T1B1 145 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 SLC25A24Q6NUK1 477 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 TRAT1Q6PIZ9 186 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 CLEC2AQ6UVW9 174 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 ATRAIDQ6UW56 229 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 CLEC9AQ6UXN8 241 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 ACP7Q6ZNF0 438 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 TMEM182Q6ZP80 229 aaPredicted RBP6.36□□□□□ -1.39
LRRC28-211ENST00000558890 C5orf24Q7Z6I8 188 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 PUSL1Q8N0Z8 303 aaKnown RBP6.36□□□□□ -1.39
LRRC28-211ENST00000558890 CIARTQ8N365 385 aaPredicted RBP6.36□□□□□ -1.39
LRRC28-211ENST00000558890 FAM213BQ8TBF2 198 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 GALMQ96C23 342 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 GPR146Q96CH1 333 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 BSCL2Q96G97 398 aaPredicted RBP6.36□□□□□ -1.39
LRRC28-211ENST00000558890 ATP5SQ99766 215 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 MAGT1Q9H0U3 335 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 FAM234AQ9H0X4 552 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 NCOR1P1Q9H4R4 102 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 WFDC1Q9HC57 220 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 CACFD1Q9UGQ2 172 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 FAM96BQ9Y3D0 163 aa6.36□□□□□ -1.39
LRRC28-211ENST00000558890 YLPM1P49750 1951 aaKnown RBP6.36□□□□□ -1.39
LRRC28-211ENST00000558890 ABCA2Q9BZC7 2435 aa6.35□□□□□ -1.39
LRRC28-211ENST00000558890 C2CD3Q4AC94 2353 aa6.35□□□□□ -1.39
LRRC28-211ENST00000558890 MXRA5Q9NR99 2828 aa6.35□□□□□ -1.39
LRRC28-211ENST00000558890 PPIAL4EA0A075B759 164 aa6.35□□□□□ -1.39
LRRC28-211ENST00000558890 TRAV39A0A0B4J263 110 aa6.35□□□□□ -1.39
LRRC28-211ENST00000558890 IGHV3-64DA0A0J9YX35 117 aa6.35□□□□□ -1.39
LRRC28-211ENST00000558890 BTBD17A6NE02 478 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms