RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 IDNKQ5T6J7 187 aa11.93□□□□□ -0.5
RPL28-206ENST00000558752 ZNF660Q6AZW8 331 aaPredicted RBP11.93□□□□□ -0.5
RPL28-206ENST00000558752 PDPNQ86YL7 162 aa11.93□□□□□ -0.5
RPL28-206ENST00000558752 DUX3Q96PT4 197 aa11.93□□□□□ -0.5
RPL28-206ENST00000558752 PRR25Q96S07 402 aa11.93□□□□□ -0.5
RPL28-206ENST00000558752 TSNAXQ99598 290 aaKnown RBP11.93□□□□□ -0.5
RPL28-206ENST00000558752 GINS4Q9BRT9 223 aa11.93□□□□□ -0.5
RPL28-206ENST00000558752 PARP12Q9H0J9 701 aaKnown RBP11.93□□□□□ -0.5
RPL28-206ENST00000558752 DIABLOQ9NR28 239 aa11.93□□□□□ -0.5
RPL28-206ENST00000558752 ZNF230Q9UIE0 474 aaPredicted RBP11.93□□□□□ -0.5
RPL28-206ENST00000558752 SPATA2Q9UM82 520 aa11.93□□□□□ -0.5
RPL28-206ENST00000558752 ZNF256Q9Y2P7 627 aaPredicted RBP11.93□□□□□ -0.5
RPL28-206ENST00000558752 TRIM64CA6NLI5 447 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 RRHO14718 337 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 AIREO43918 545 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 PROP1O75360 226 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 SLC22A5O76082 557 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 APOA2P02652 100 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 RPLP1P05386 114 aaKnown RBP11.92□□□□□ -0.5
RPL28-206ENST00000558752 OR8U9P0C7N5 309 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 RRASP10301 218 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 LGALS7P47929 136 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 LUMP51884 338 aaPredicted RBP11.92□□□□□ -0.5
RPL28-206ENST00000558752 FAM131AQ6UXB0 335 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 LGALS14Q8TCE9 139 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 YIPF6Q96EC8 236 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 ADTRPQ96IZ2 230 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 RITA1Q96K30 269 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 HSPB9Q9BQS6 159 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 ST6GALNAC5Q9BVH7 336 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 OR51J1Q9H342 316 aa11.92□□□□□ -0.5
RPL28-206ENST00000558752 RBM7Q9Y580 266 aaKnown RBP11.92□□□□□ -0.5
RPL28-206ENST00000558752 SPDEFO95238 335 aa11.91□□□□□ -0.5
RPL28-206ENST00000558752 CLEC2LP0C7M8 214 aa11.91□□□□□ -0.5
RPL28-206ENST00000558752 GNG2P59768 71 aa11.91□□□□□ -0.5
RPL28-206ENST00000558752 CFHR3Q02985 330 aa11.91□□□□□ -0.5
RPL28-206ENST00000558752 TMEM267Q0VDI3 215 aaPredicted RBP11.91□□□□□ -0.5
RPL28-206ENST00000558752 CBX3Q13185 183 aa11.91□□□□□ -0.5
RPL28-206ENST00000558752 CNIH2Q6PI25 160 aa11.91□□□□□ -0.5
RPL28-206ENST00000558752 TCTEX1D1Q8N7M0 179 aa11.91□□□□□ -0.5
RPL28-206ENST00000558752 C4orf3Q8WVX3 66 aa11.91□□□□□ -0.5
RPL28-206ENST00000558752 FLYWCH2Q96CP2 140 aaKnown RBP11.91□□□□□ -0.5
RPL28-206ENST00000558752 RNF167Q9H6Y7 350 aa11.91□□□□□ -0.5
RPL28-206ENST00000558752 SMAD5-AS1Q9Y6J3 95 aa11.91□□□□□ -0.5
RPL28-206ENST00000558752 IGHV7-81A0A0B4J1V7 117 aa11.9□□□□□ -0.5
RPL28-206ENST00000558752 M0R1X1 148 aa11.9□□□□□ -0.5
RPL28-206ENST00000558752 RPS16P62249 146 aaKnown RBP11.9□□□□□ -0.5
RPL28-206ENST00000558752 PLGLAQ15195 96 aa11.9□□□□□ -0.5
RPL28-206ENST00000558752 DEFB136Q30KP8 78 aa11.9□□□□□ -0.5
RPL28-206ENST00000558752 TMEM65Q6PI78 240 aa11.9□□□□□ -0.5
RPL28-206ENST00000558752 ZNF562Q6V9R5 426 aa11.9□□□□□ -0.5
RPL28-206ENST00000558752 H1FOOQ8IZA3 346 aaPredicted RBP11.9□□□□□ -0.5
RPL28-206ENST00000558752 ZNF383Q8NA42 475 aa11.9□□□□□ -0.5
RPL28-206ENST00000558752 S100A16Q96FQ6 103 aaKnown RBP11.9□□□□□ -0.5
RPL28-206ENST00000558752 ASCL2Q99929 193 aa11.9□□□□□ -0.5
RPL28-206ENST00000558752 TRAV18A0A075B6X5 111 aa11.89□□□□□ -0.51
RPL28-206ENST00000558752 LY86O95711 162 aa11.89□□□□□ -0.51
RPL28-206ENST00000558752 OR8U8P0C7N1 319 aa11.89□□□□□ -0.51
RPL28-206ENST00000558752 CNTFRP26992 372 aa11.89□□□□□ -0.51
RPL28-206ENST00000558752 PSMB8P28062 276 aa11.89□□□□□ -0.51
RPL28-206ENST00000558752 PPIFP30405 207 aaKnown RBP11.89□□□□□ -0.51
RPL28-206ENST00000558752 CBX5P45973 191 aa11.89□□□□□ -0.51
RPL28-206ENST00000558752 CRIP2P52943 208 aaPredicted RBP11.89□□□□□ -0.51
RPL28-206ENST00000558752 GLDNQ6ZMI3 551 aaPredicted RBP11.89□□□□□ -0.51
RPL28-206ENST00000558752 DRAXINQ8NBI3 349 aaPredicted RBP11.89□□□□□ -0.51
RPL28-206ENST00000558752 MUC7Q8TAX7 377 aa11.89□□□□□ -0.51
RPL28-206ENST00000558752 KCTD12Q96CX2 325 aaKnown RBP11.89□□□□□ -0.51
RPL28-206ENST00000558752 OR2D2Q9H210 308 aa11.89□□□□□ -0.51
RPL28-206ENST00000558752 SLC35D1Q9NTN3 355 aa11.89□□□□□ -0.51
RPL28-206ENST00000558752 SDHAF2Q9NX18 166 aa11.89□□□□□ -0.51
RPL28-206ENST00000558752 OR2W1Q9Y3N9 320 aa11.89□□□□□ -0.51
RPL28-206ENST00000558752 TRAV41A0A0B4J266 112 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 TMEM235A6NFC5 223 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 XRCC3O43542 346 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 HLA-DQB1P01920 261 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 RPS19P39019 145 aaKnown RBP11.88□□□□□ -0.51
RPL28-206ENST00000558752 CX3CL1P78423 397 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 PSG5Q15238 335 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 RTL8BQ17RB0 113 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 AKIRIN2Q53H80 203 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 ZNF429Q86V71 674 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 MINDY2Q8NBR6 621 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 OR11H1Q8NG94 326 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 OR5H6Q8NGV6 325 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 MAFIPQ8WZ33 124 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 FBXL15Q9H469 300 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 SCOCQ9UIL1 159 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 ANXA10Q9UJ72 324 aa11.88□□□□□ -0.51
RPL28-206ENST00000558752 ELF5Q9UKW6 265 aaPredicted RBP11.88□□□□□ -0.51
RPL28-206ENST00000558752 TENM2Q9NT68 2774 aa11.87□□□□□ -0.51
RPL28-206ENST00000558752 IGLV1-40P01703 118 aa11.87□□□□□ -0.51
RPL28-206ENST00000558752 IGKV1-16P04430 117 aa11.87□□□□□ -0.51
RPL28-206ENST00000558752 CD40LGP29965 261 aa11.87□□□□□ -0.51
RPL28-206ENST00000558752 FHL3Q13643 280 aa11.87□□□□□ -0.51
RPL28-206ENST00000558752 NUDCD2Q8WVJ2 157 aa11.87□□□□□ -0.51
RPL28-206ENST00000558752 SLC25A38Q96DW6 304 aa11.87□□□□□ -0.51
RPL28-206ENST00000558752 UBE2E2Q96LR5 201 aa11.87□□□□□ -0.51
RPL28-206ENST00000558752 CMTM3Q96MX0 182 aa11.87□□□□□ -0.51
RPL28-206ENST00000558752 AUNIPQ9H7T9 357 aa11.87□□□□□ -0.51
RPL28-206ENST00000558752 ZMAT4Q9H898 229 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 214.9 ms