RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ZNF621Q6ZSS3 439 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 PGAP1Q75T13 922 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 SLC35D2Q76EJ3 337 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 GRINAQ7Z429 371 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 CMTM1Q8IZ96 169 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 LYPD1Q8N2G4 141 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 CDRT4Q8N9R6 151 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 OR5AK3PQ8NH89 298 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 LYPD6BQ8NI32 183 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 GTF2H4Q92759 462 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 PPCDCQ96CD2 204 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 TMEM80Q96HE8 168 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 FCRL1Q96LA6 429 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 OR2M2Q96R28 347 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 NDEL1Q9GZM8 345 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 C1orf198Q9H425 327 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 ELL3Q9HB65 397 aaPredicted RBP4.01□□□□□ -1.77
RTF1-204ENST00000558117 ZC4H2Q9NQZ6 224 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 GID8Q9NWU2 228 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 KIF25Q9UIL4 384 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 TMED7-TICAM2A0A0A6YYA0 188 aa4□□□□□ -1.77
RTF1-204ENST00000558117 FAM168BA1KXE4 195 aa4□□□□□ -1.77
RTF1-204ENST00000558117 PRORSD1PA6NEY8 169 aa4□□□□□ -1.77
RTF1-204ENST00000558117 H3BSA7 217 aa4□□□□□ -1.77
RTF1-204ENST00000558117 M0R2N4 97 aa4□□□□□ -1.77
RTF1-204ENST00000558117 FXYD1O00168 92 aa4□□□□□ -1.77
RTF1-204ENST00000558117 NME4O00746 187 aa4□□□□□ -1.77
RTF1-204ENST00000558117 CRTAPO75718 401 aaPredicted RBP4□□□□□ -1.77
RTF1-204ENST00000558117 CST4P01036 141 aa4□□□□□ -1.77
RTF1-204ENST00000558117 GIG44P09565 113 aaPredicted RBP4□□□□□ -1.77
RTF1-204ENST00000558117 IFI6P09912 130 aa4□□□□□ -1.77
RTF1-204ENST00000558117 PSMB6P28072 239 aa4□□□□□ -1.77
RTF1-204ENST00000558117 OR3A4PP47883 348 aa4□□□□□ -1.77
RTF1-204ENST00000558117 MFAP2P55001 183 aa4□□□□□ -1.77
RTF1-204ENST00000558117 IL18R1Q13478 541 aa4□□□□□ -1.77
RTF1-204ENST00000558117 OR7A5Q15622 319 aa4□□□□□ -1.77
RTF1-204ENST00000558117 RPEL1Q2QD12 228 aa4□□□□□ -1.77
RTF1-204ENST00000558117 LGALS9BQ3B8N2 356 aa4□□□□□ -1.77
RTF1-204ENST00000558117 OR2G6Q5TZ20 316 aa4□□□□□ -1.77
RTF1-204ENST00000558117 C1orf146Q5VVC0 180 aa4□□□□□ -1.77
RTF1-204ENST00000558117 ACP7Q6ZNF0 438 aa4□□□□□ -1.77
RTF1-204ENST00000558117 OLIG3Q7RTU3 272 aa4□□□□□ -1.77
RTF1-204ENST00000558117 CYP4Z1Q86W10 505 aa4□□□□□ -1.77
RTF1-204ENST00000558117 C20orf196Q8IYI0 205 aa4□□□□□ -1.77
RTF1-204ENST00000558117 PGAM4Q8N0Y7 254 aa4□□□□□ -1.77
RTF1-204ENST00000558117 SYS1Q8N2H4 156 aa4□□□□□ -1.77
RTF1-204ENST00000558117 C10orf111Q8N326 155 aa4□□□□□ -1.77
RTF1-204ENST00000558117 MTURNQ8N3F0 131 aa4□□□□□ -1.77
RTF1-204ENST00000558117 OR10A6Q8NH74 314 aa4□□□□□ -1.77
RTF1-204ENST00000558117 RFESDQ8TAC1 157 aa4□□□□□ -1.77
RTF1-204ENST00000558117 RPS4Y2Q8TD47 263 aa4□□□□□ -1.77
RTF1-204ENST00000558117 TCTEX1D2Q8WW35 142 aa4□□□□□ -1.77
RTF1-204ENST00000558117 FRZBQ92765 325 aa4□□□□□ -1.77
RTF1-204ENST00000558117 STMN2Q93045 179 aa4□□□□□ -1.77
RTF1-204ENST00000558117 ISOC2Q96AB3 205 aa4□□□□□ -1.77
RTF1-204ENST00000558117 DDIT4LQ96D03 193 aa4□□□□□ -1.77
RTF1-204ENST00000558117 CGREF1Q99674 301 aa4□□□□□ -1.77
RTF1-204ENST00000558117 RBKSQ9H477 322 aa4□□□□□ -1.77
RTF1-204ENST00000558117 PIGUQ9H490 435 aa4□□□□□ -1.77
RTF1-204ENST00000558117 MIEF1Q9NQG6 463 aa4□□□□□ -1.77
RTF1-204ENST00000558117 PAK1IP1Q9NWT1 392 aaPredicted RBP4□□□□□ -1.77
RTF1-204ENST00000558117 THUMPD1Q9NXG2 353 aaKnown RBP4□□□□□ -1.77
RTF1-204ENST00000558117 SLC25A37Q9NYZ2 338 aa4□□□□□ -1.77
RTF1-204ENST00000558117 VAPAQ9P0L0 249 aa4□□□□□ -1.77
RTF1-204ENST00000558117 WARS2Q9UGM6 360 aaKnown RBP4□□□□□ -1.77
RTF1-204ENST00000558117 CELA1Q9UNI1 258 aa4□□□□□ -1.77
RTF1-204ENST00000558117 COPS3Q9UNS2 423 aa4□□□□□ -1.77
RTF1-204ENST00000558117 SAMD4AQ9UPU9 718 aaKnown RBP4□□□□□ -1.77
RTF1-204ENST00000558117 V9GYQ6 96 aa4□□□□□ -1.77
RTF1-204ENST00000558117 A0A096LPI6 279 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 IGHV3-64DA0A0J9YX35 117 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 BBIP1A8MTZ0 92 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 CCRL2O00421 344 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 HSBP1O75506 76 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 MGMTP16455 207 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 ATP6V1B2P21281 511 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 HBA1P69905 142 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 SAMD4BQ5PRF9 694 aaKnown RBP3.99□□□□□ -1.77
RTF1-204ENST00000558117 UTF1Q5T230 341 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 ARL9Q6T311 187 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 HMGN2P46Q86SG4 172 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 COX18Q8N8Q8 333 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 CYB561A3Q8NBI2 242 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 OR6Q1Q8NGQ2 317 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 PYDC1Q8WXC3 89 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 MAL2Q969L2 176 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 TESCQ96BS2 214 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 ROPN1LQ96C74 230 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 CCDC115Q96NT0 180 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 HOPXQ9BPY8 73 aaPredicted RBP3.99□□□□□ -1.77
RTF1-204ENST00000558117 KCTD14Q9BQ13 255 aaPredicted RBP3.99□□□□□ -1.77
RTF1-204ENST00000558117 METTL8Q9H825 291 aaKnown RBP3.99□□□□□ -1.77
RTF1-204ENST00000558117 TUBA4BQ9H853 241 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 AMBNQ9NP70 447 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 EXOSC3Q9NQT5 275 aaKnown RBP3.99□□□□□ -1.77
RTF1-204ENST00000558117 Q9UF83 564 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 MRM2Q9UI43 246 aaKnown RBP3.99□□□□□ -1.77
RTF1-204ENST00000558117 RIMS3Q9UJD0 308 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 APLNQ9ULZ1 77 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 POMPQ9Y244 141 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms