RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 CD47Q08722 323 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 RHEBQ15382 184 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 ACSM3Q53FZ2 586 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 KHDC3LQ587J8 217 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 GCSAMLQ5JQS6 135 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 C1orf194Q5T5A4 169 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 IDNKQ5T6J7 187 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 GGNBP1Q5YKI7 109 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 OR10K2Q6IF99 312 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 ZNF613Q6PF04 617 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 ZNF621Q6ZSS3 439 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 SERPINA11Q86U17 422 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 LRRTM1Q86UE6 522 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 LAX1Q8IWV1 398 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 LGI3Q8N145 548 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 LYG1Q8N1E2 194 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 HIST3H2BBQ8N257 126 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 C11orf44Q8N8P7 122 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 OR4S1Q8NGB4 309 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 OR4K5Q8NGD3 323 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 OR4D5Q8NGN0 318 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 OR10X1Q8NGY0 326 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 KCNG3Q8TAE7 436 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 SLC25A40Q8TBP6 338 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 SLCO4A1Q96BD0 722 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 MRAP2Q96G30 205 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 ITCHQ96J02 903 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 TEX37Q96LM6 180 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 CCDC115Q96NT0 180 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 IL4I1Q96RQ9 567 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 TMEM43Q9BTV4 400 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 PBDC1Q9BVG4 233 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 MAGT1Q9H0U3 335 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 ACOT13Q9NPJ3 140 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 ASIC5Q9NY37 505 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 DOK5Q9P104 306 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 RAB22AQ9UL26 194 aa3.99□□□□□ -1.77
ATXN3-247ENST00000557311 C14orf166Q9Y224 244 aaKnown RBP3.99□□□□□ -1.77
ATXN3-247ENST00000557311 ZNF443Q9Y2A4 671 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-247ENST00000557311 TSSC4Q9Y5U2 329 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-247ENST00000557311 IGKV1D-42A0A075B6H8 117 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 CENPVL3A0A0U1RRI6 287 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 TMEM213A2RRL7 107 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 C5orf49A4QMS7 147 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 HMSDA8MTL9 139 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 RNASEK-C17orf49H0YIS7 233 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 CORTO00230 105 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 SLC17A3O00476 420 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 ARPC1BO15143 372 aaKnown RBP3.98□□□□□ -1.77
ATXN3-247ENST00000557311 PLA2G10O15496 165 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 TIMM8AO60220 97 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-247ENST00000557311 PRAF2O60831 178 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 MMP23AO75900 390 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 RGS11O94810 467 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 FSTL3O95633 263 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 TSPAN13O95857 204 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 IGHV4-59P01825 116 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 BGLAPP02818 100 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 ALDOBP05062 364 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 SFTPBP07988 381 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 MMP7P09237 267 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-247ENST00000557311 NHLRC4P0CG21 123 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-247ENST00000557311 ZBTB25P24278 435 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 GADD45AP24522 165 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 F2RP25116 425 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 S100A3P33764 101 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 CRISP3P54108 245 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 S100A10P60903 97 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 PPP1CBP62140 327 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 PSG7Q13046 419 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 BATFQ16520 125 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 PCK2Q16822 640 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 SNAI3Q3KNW1 292 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 ALG10BQ5I7T1 473 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 DEFB121Q5J5C9 76 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 TMEM255AQ5JRV8 349 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 TMEM268Q5VZI3 342 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 ZNF57Q68EA5 555 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-247ENST00000557311 AWAT2Q6E213 333 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 SLC35E4Q6ICL7 350 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 OR4A47Q6IF82 309 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 CCDC144NLQ6NUI1 221 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 C11orf87Q6NUJ2 197 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 FAAP20Q6NZ36 180 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 ARL9Q6T311 187 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 FBXW12Q6X9E4 464 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 IL34Q6ZMJ4 242 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 DPY19L4Q7Z388 723 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 ZNF101Q8IZC7 436 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 OR6V1Q8N148 313 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 OR2Z1Q8NG97 314 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 OR11H7Q8NGC8 314 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 OR8B3Q8NGG8 313 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 SLC38A5Q8WUX1 472 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 PTH2Q96A98 100 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 PHYHIPLQ96FC7 376 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 GALNT14Q96FL9 552 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 SLC25A44Q96H78 314 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-247ENST00000557311 DIRAS2Q96HU8 199 aa3.98□□□□□ -1.77
ATXN3-247ENST00000557311 HIST1H2AAQ96QV6 131 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms