RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 IDO2Q6ZQW0 420 aa10.26□□□□□ -0.77
SHMT2-227ENST00000557269 THNSL2Q86YJ6 484 aa10.26□□□□□ -0.77
SHMT2-227ENST00000557269 BVESQ8NE79 360 aa10.26□□□□□ -0.77
SHMT2-227ENST00000557269 DDB2Q92466 427 aa10.26□□□□□ -0.77
SHMT2-227ENST00000557269 EAF1Q96JC9 268 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-227ENST00000557269 SLC2A8Q9NY64 477 aa10.26□□□□□ -0.77
SHMT2-227ENST00000557269 VPREB3Q9UKI3 123 aa10.26□□□□□ -0.77
SHMT2-227ENST00000557269 POMT1Q9Y6A1 747 aa10.26□□□□□ -0.77
SHMT2-227ENST00000557269 CLDN34H7C241 214 aa10.25□□□□□ -0.77
SHMT2-227ENST00000557269 PGLYRP1O75594 196 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-227ENST00000557269 UPK1BO75841 260 aa10.25□□□□□ -0.77
SHMT2-227ENST00000557269 SLC22A5O76082 557 aa10.25□□□□□ -0.77
SHMT2-227ENST00000557269 IGKV1-16P04430 117 aa10.25□□□□□ -0.77
SHMT2-227ENST00000557269 EBI3Q14213 229 aa10.25□□□□□ -0.77
SHMT2-227ENST00000557269 MSMO1Q15800 293 aa10.25□□□□□ -0.77
SHMT2-227ENST00000557269 OR2B11Q5JQS5 317 aa10.25□□□□□ -0.77
SHMT2-227ENST00000557269 TMEM86BQ8N661 226 aa10.25□□□□□ -0.77
SHMT2-227ENST00000557269 Q8N6K4 173 aa10.25□□□□□ -0.77
SHMT2-227ENST00000557269 OR5R1Q8NH85 324 aa10.25□□□□□ -0.77
SHMT2-227ENST00000557269 AKR1E2Q96JD6 320 aa10.25□□□□□ -0.77
SHMT2-227ENST00000557269 PRRT1Q99946 306 aa10.25□□□□□ -0.77
SHMT2-227ENST00000557269 TBC1D24Q9ULP9 559 aa10.25□□□□□ -0.77
SHMT2-227ENST00000557269 SETD2Q9BYW2 2564 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-227ENST00000557269 A0A0A6YYJ9 748 aa10.24□□□□□ -0.77
SHMT2-227ENST00000557269 BTBD17A6NE02 478 aa10.24□□□□□ -0.77
SHMT2-227ENST00000557269 GPR31O00270 319 aa10.24□□□□□ -0.77
SHMT2-227ENST00000557269 GPR137BO60478 399 aa10.24□□□□□ -0.77
SHMT2-227ENST00000557269 RNASE1P07998 156 aaKnown RBP10.24□□□□□ -0.77
SHMT2-227ENST00000557269 FAM106CPP0CH98 169 aa10.24□□□□□ -0.77
SHMT2-227ENST00000557269 PGAM2P15259 253 aa10.24□□□□□ -0.77
SHMT2-227ENST00000557269 CNTFRP26992 372 aa10.24□□□□□ -0.77
SHMT2-227ENST00000557269 FAUP35544 74 aaKnown RBP10.24□□□□□ -0.77
SHMT2-227ENST00000557269 THBS3P49746 956 aa10.24□□□□□ -0.77
SHMT2-227ENST00000557269 CCR6P51684 374 aa10.24□□□□□ -0.77
SHMT2-227ENST00000557269 ARHGDIBP52566 201 aa10.24□□□□□ -0.77
SHMT2-227ENST00000557269 HES1Q14469 280 aa10.24□□□□□ -0.77
SHMT2-227ENST00000557269 SLC38A6Q8IZM9 456 aa10.24□□□□□ -0.77
SHMT2-227ENST00000557269 ZBTB34Q8NCN2 500 aa10.24□□□□□ -0.77
SHMT2-227ENST00000557269 RTBDNQ9BSG5 229 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-227ENST00000557269 PLSCR3Q9NRY6 295 aa10.24□□□□□ -0.77
SHMT2-227ENST00000557269 VSIG4Q9Y279 399 aa10.24□□□□□ -0.77
SHMT2-227ENST00000557269 H7C2Y5 167 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 MOSP00540 346 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 IFNA2P01563 188 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 AMY1AP04745 511 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 RLN1P04808 185 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 TMEM11P17152 192 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 F2RL1P55085 397 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 LPCAT3Q6P1A2 487 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 C16orf87Q6PH81 154 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 ZNF66Q6ZN08 573 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 KCTD9Q7L273 389 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 OR2T10Q8NGZ9 312 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 OR51H1Q8NH63 302 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 TCTEX1D2Q8WW35 142 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 DEDD2Q8WXF8 326 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 RBM14Q96PK6 669 aaKnown RBP10.23□□□□□ -0.77
SHMT2-227ENST00000557269 JMJD8Q96S16 334 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 TSC22D3Q99576 134 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 HSD17B10Q99714 261 aaKnown RBP10.23□□□□□ -0.77
SHMT2-227ENST00000557269 C5orf66Q9H5L9 145 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 SLC35D1Q9NTN3 355 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 SCP2D1Q9UJQ7 156 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 GPR132Q9UNW8 380 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 WASHC3Q9Y3C0 194 aa10.23□□□□□ -0.77
SHMT2-227ENST00000557269 FAM181BA6NEQ2 426 aa10.22□□□□□ -0.77
SHMT2-227ENST00000557269 SH2D7A6NKC9 451 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-227ENST00000557269 LYRM1O43325 122 aa10.22□□□□□ -0.77
SHMT2-227ENST00000557269 RAMP3O60896 148 aa10.22□□□□□ -0.77
SHMT2-227ENST00000557269 FCGR3BO75015 233 aa10.22□□□□□ -0.77
SHMT2-227ENST00000557269 PEX14O75381 377 aa10.22□□□□□ -0.77
SHMT2-227ENST00000557269 OR2F2O95006 317 aa10.22□□□□□ -0.77
SHMT2-227ENST00000557269 CTSDP07339 412 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-227ENST00000557269 MC5RP33032 325 aa10.22□□□□□ -0.77
SHMT2-227ENST00000557269 PIGPP57054 158 aa10.22□□□□□ -0.77
SHMT2-227ENST00000557269 Q6ZS46 218 aa10.22□□□□□ -0.77
SHMT2-227ENST00000557269 TBC1D26Q86UD7 250 aa10.22□□□□□ -0.77
SHMT2-227ENST00000557269 ADAD2Q8NCV1 583 aaKnown RBP10.22□□□□□ -0.77
SHMT2-227ENST00000557269 ADTRPQ96IZ2 230 aa10.22□□□□□ -0.77
SHMT2-227ENST00000557269 SLC25A33Q9BSK2 321 aa10.22□□□□□ -0.77
SHMT2-227ENST00000557269 SLC2A9Q9NRM0 540 aa10.22□□□□□ -0.77
SHMT2-227ENST00000557269 NAP1L6A6NFF2 107 aa10.21□□□□□ -0.77
SHMT2-227ENST00000557269 SRRM4A7MD48 611 aaKnown RBP10.21□□□□□ -0.77
SHMT2-227ENST00000557269 MPPED1O15442 326 aa10.21□□□□□ -0.77
SHMT2-227ENST00000557269 APOA2P02652 100 aa10.21□□□□□ -0.77
SHMT2-227ENST00000557269 VSIG10L2P0DP72 767 aa10.21□□□□□ -0.77
SHMT2-227ENST00000557269 RND3P61587 244 aa10.21□□□□□ -0.77
SHMT2-227ENST00000557269 RELBQ01201 579 aa10.21□□□□□ -0.77
SHMT2-227ENST00000557269 ASAH1Q13510 395 aa10.21□□□□□ -0.77
SHMT2-227ENST00000557269 SURF2Q15527 256 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-227ENST00000557269 PDPNQ86YL7 162 aa10.21□□□□□ -0.77
SHMT2-227ENST00000557269 CMTM1Q8IZ96 169 aa10.21□□□□□ -0.77
SHMT2-227ENST00000557269 ZFAND1Q8TCF1 268 aa10.21□□□□□ -0.77
SHMT2-227ENST00000557269 BORCS5Q969J3 196 aa10.21□□□□□ -0.77
SHMT2-227ENST00000557269 TMEM230Q96A57 120 aa10.21□□□□□ -0.77
SHMT2-227ENST00000557269 C7orf50Q9BRJ6 194 aaKnown RBP10.21□□□□□ -0.77
SHMT2-227ENST00000557269 PITPNC1Q9UKF7 332 aa10.21□□□□□ -0.77
SHMT2-227ENST00000557269 FLVCR2Q9UPI3 526 aa10.21□□□□□ -0.77
SHMT2-227ENST00000557269 JMJD1CQ15652 2540 aa10.21□□□□□ -0.78
SHMT2-227ENST00000557269 CENPXA8MT69 81 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms