RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 COA6Q5JTJ3 125 aaKnown RBP9.56□□□□□ -0.88
SRP54-213ENST00000556994 MOB1BQ7L9L4 216 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 TMPRSS7Q7RTY8 843 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 MCEMP1Q8IX19 187 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 ZNF645Q8N7E2 425 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 TMEM105Q8N8V8 129 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 NEIL1Q96FI4 390 aaPredicted RBP9.56□□□□□ -0.88
SRP54-213ENST00000556994 ATG101Q9BSB4 218 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 RTL8AQ9BWD3 113 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 TTTY12Q9BZ98 90 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 MBNL3Q9NUK0 354 aaKnown RBP9.56□□□□□ -0.88
SRP54-213ENST00000556994 OR6C3Q9NZP0 311 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 MED13Q9UHV7 2174 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 IGHV3-43A0A0B4J1X8 118 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 B4E171 279 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 SH2D1BO14796 132 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 WNT9BO14905 357 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 ST8SIA5O15466 376 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 IGHV3-43DP0DP04 118 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 TSPAN7P41732 249 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 ATP5G3P48201 142 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 AESQ08117 197 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 Q3ZCU0 254 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 CST9LP1Q5W188 147 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 C6orf15Q6UXA7 325 aaPredicted RBP9.55□□□□□ -0.88
SRP54-213ENST00000556994 TPRX1Q8N7U7 411 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 ZNF709Q8N972 641 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 ANAPC16Q96DE5 110 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 ACY3Q96HD9 319 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 C2orf88Q9BSF0 95 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 TMEM204Q9BSN7 226 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 DDA1Q9BW61 102 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 MANBALQ9NQG1 85 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.55□□□□□ -0.88
SRP54-213ENST00000556994 LOC400499M0QZD8 3231 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 PRR14LQ5THK1 2151 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 TMEM265A0A087WTH1 108 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 RNF212BA8MTL3 300 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 DEFB108AA8MXU0 73 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 C12orf77C9JDV5 145 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 EREGO14944 169 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 GGCTO75223 188 aaKnown RBP9.55□□□□□ -0.88
SRP54-213ENST00000556994 GCGP01275 180 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 PDLIM4P50479 330 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 ERVK11-1P61568 191 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 PLGLB1Q02325 96 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 MSMO1Q15800 293 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 ZNF826PQ6ZT77 177 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 TMEM251Q8N6I4 163 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 GALMQ96C23 342 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 NOL4LQ96MY1 436 aaPredicted RBP9.55□□□□□ -0.88
SRP54-213ENST00000556994 NDUFAF3Q9BU61 184 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 LOXL2Q9Y4K0 774 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 WIPI2Q9Y4P8 454 aa9.55□□□□□ -0.88
SRP54-213ENST00000556994 A0A0U1RQK1 487 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 ZNF320A2RRD8 509 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 NDUFB4O95168 129 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 MBP02144 154 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 C1QTNF9P0C862 333 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 RAC2P15153 192 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 HNF1AP20823 631 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 IL3RAP26951 378 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 DUSP3P51452 185 aaPredicted RBP9.54□□□□□ -0.88
SRP54-213ENST00000556994 GNB1P62873 340 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 PAX5Q02548 391 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 SLC10A1Q14973 349 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 OR1C1Q15619 314 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 ATP6V1FQ16864 119 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 ABHD17BQ5VST6 288 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 TMEM256Q8N2U0 113 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 ZNF114Q8NC26 417 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 RFESDQ8TAC1 157 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 TMEM18Q96B42 140 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 PLPPR2Q96GM1 343 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 LURAP1Q96LR2 239 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 GP6Q9HCN6 339 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 KCNIP1Q9NZI2 227 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 B4GALT7Q9UBV7 327 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 ZFHX4Q86UP3 3567 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 NUPR1O60356 82 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 SCGB1D1O95968 90 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 HAND1O96004 215 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 PDGFBP01127 241 aaPredicted RBP9.54□□□□□ -0.88
SRP54-213ENST00000556994 HBZP02008 142 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 P0C879 139 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 COL8A2P25067 703 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 CDC34P49427 236 aaPredicted RBP9.54□□□□□ -0.88
SRP54-213ENST00000556994 CNN1P51911 297 aaKnown RBP9.54□□□□□ -0.88
SRP54-213ENST00000556994 EDDM3BP56851 147 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 H2BFWTQ7Z2G1 175 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 LINC01551Q86U37 167 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 MRGPRDQ8TDS7 321 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 SDSLQ96GA7 329 aa9.54□□□□□ -0.88
SRP54-213ENST00000556994 LINC00473A8K010 186 aa9.53□□□□□ -0.88
SRP54-213ENST00000556994 SOX15O60248 233 aa9.53□□□□□ -0.88
SRP54-213ENST00000556994 CD33P20138 364 aa9.53□□□□□ -0.88
SRP54-213ENST00000556994 SRP14P37108 136 aaKnown RBP9.53□□□□□ -0.88
SRP54-213ENST00000556994 ZNF146Q15072 292 aa9.53□□□□□ -0.88
SRP54-213ENST00000556994 LTC4SQ16873 150 aa9.53□□□□□ -0.88
SRP54-213ENST00000556994 TEX38Q6PEX7 206 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms