RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 GCSAMQ8N6F7 178 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 CD177Q8N6Q3 437 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 TCTEX1D1Q8N7M0 179 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 RELL2Q8NC24 303 aaPredicted RBP3.69□□□□□ -1.82
SRP54-212ENST00000556992 OR8U1Q8NH10 309 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 LRRC20Q8TCA0 184 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 FAM222BQ8WU58 562 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 DCUN1D4Q92564 292 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 ARL11Q969Q4 196 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 SDSLQ96GA7 329 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 ABHD14BQ96IU4 210 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 AQP10Q96PS8 301 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 TOLLIPQ9H0E2 274 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 SHARPINQ9H0F6 387 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 FAM234AQ9H0X4 552 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 DNTTIP1Q9H147 329 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 SLC25A32Q9H2D1 315 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 HIPK2Q9H2X6 1198 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 PRORYQ9H606 182 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 KCNJ16Q9NPI9 418 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 OR2S2Q9NQN1 319 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 ZC4H2Q9NQZ6 224 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 OR6C3Q9NZP0 311 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 MBD2Q9UBB5 411 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 LPAR3Q9UBY5 353 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 PPP1R3CQ9UQK1 317 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 NSG2Q9Y328 171 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 CENPEQ02224 2701 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 USP9YO00507 2555 aaPredicted RBP3.68□□□□□ -1.82
SRP54-212ENST00000556992 SETD2Q9BYW2 2564 aaPredicted RBP3.68□□□□□ -1.82
SRP54-212ENST00000556992 PCNX3Q9H6A9 2034 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 MED12Q93074 2177 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 IGKV1D-17A0A075B6S4 117 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 TRAV39A0A0B4J263 110 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 TRAV38-1A0A0B4J264 116 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 IGKV1D-13A0A0B4J2D9 117 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 ODAMA1E959 279 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 CLEC18AA5D8T8 446 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 RNF222A6NCQ9 220 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 C17orf100A8MU93 164 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 MPTX1A8MV57 137 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 B9A039 149 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 LGALS8O00214 317 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 NDUFA2O43678 99 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 GPR137BO60478 399 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 DEDDO75618 318 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 CFDP00746 253 aaPredicted RBP3.68□□□□□ -1.82
SRP54-212ENST00000556992 HBZP02008 142 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 MBPP02686 304 aaPredicted RBP3.68□□□□□ -1.82
SRP54-212ENST00000556992 IGKV1-13P0DP09 117 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 TPT1P13693 172 aaKnown RBP3.68□□□□□ -1.82
SRP54-212ENST00000556992 MMP9P14780 707 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 RPL12P30050 165 aaKnown RBP3.68□□□□□ -1.82
SRP54-212ENST00000556992 P2RY1P47900 373 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 GLIPR1P48060 266 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 P2RX3P56373 397 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 S100A10P60903 97 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 RAB32Q13637 225 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 EFNB3Q15768 340 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 TMEM30BQ3MIR4 351 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 BEX5Q5H9J7 111 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 TEX36Q5VZQ5 186 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 MEX3BQ6ZN04 569 aaKnown RBP3.68□□□□□ -1.82
SRP54-212ENST00000556992 C9orf47Q6ZRZ4 202 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 BAP18Q8IXM2 172 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 C1orf87Q8N0U7 546 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 PRR18Q8N4B5 295 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 SLC35G3Q8N808 338 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 CLEC18CQ8NCF0 446 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 OR1S1Q8NH92 325 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 OR1L1Q8NH94 360 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 ANGPTL6Q8NI99 470 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 STOML3Q8TAV4 291 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 OSR1Q8TAX0 266 aaPredicted RBP3.68□□□□□ -1.82
SRP54-212ENST00000556992 CD300LFQ8TDQ1 290 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 MRGPRDQ8TDS7 321 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 CA5BP1Q8WTZ4 195 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 ITLN1Q8WWA0 313 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 CORO2AQ92828 525 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 RBPMSQ93062 196 aaKnown RBP3.68□□□□□ -1.82
SRP54-212ENST00000556992 LSM10Q969L4 123 aaKnown RBP3.68□□□□□ -1.82
SRP54-212ENST00000556992 RRNAD1Q96FB5 475 aaKnown RBP3.68□□□□□ -1.82
SRP54-212ENST00000556992 COQ2Q96H96 371 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 TP53RKQ96S44 253 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 ZNF471Q9BX82 626 aaPredicted RBP3.68□□□□□ -1.82
SRP54-212ENST00000556992 SLC25A31Q9H0C2 315 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 ZNF665Q9H7R5 613 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 FAM212BQ9NTI7 297 aaPredicted RBP3.68□□□□□ -1.82
SRP54-212ENST00000556992 MED9Q9NWA0 146 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 OR1A1Q9P1Q5 309 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 CACFD1Q9UGQ2 172 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 GAB2Q9UQC2 676 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 TP53BP1Q12888 1972 aaPredicted RBP3.68□□□□□ -1.82
SRP54-212ENST00000556992 EXPH5Q8NEV8 1989 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 CACNA1CQ13936 2221 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 DOPEY1Q5JWR5 2465 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 FREM3P0C091 2139 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 SPENQ96T58 3664 aaKnown RBP3.68□□□□□ -1.82
SRP54-212ENST00000556992 RALGAPA1Q6GYQ0 2036 aa3.68□□□□□ -1.82
SRP54-212ENST00000556992 OTOGQ6ZRI0 2925 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms