RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SULT1A2P50226 295 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 PAX9P55771 341 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 EDDM3BP56851 147 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 BRWD1-AS2P59051 145 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 RPL30P62888 115 aaKnown RBP6.84□□□□□ -1.31
ATXN3-235ENST00000556082 EWSR1Q01844 656 aaKnown RBP eCLIP6.84□□□□□ -1.31
ATXN3-235ENST00000556082 TFF3Q07654 80 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 AARDQ4LEZ3 155 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 FAM201AQ5SY85 155 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 UQCC3Q6UW78 93 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 ZNF808Q8N4W9 903 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-235ENST00000556082 DEFB108BQ8NET1 73 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 LINC01560Q8TB33 94 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 CA5BP1Q8WTZ4 195 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 PCNPQ8WW12 178 aaKnown RBP6.84□□□□□ -1.31
ATXN3-235ENST00000556082 CXorf58Q96LI9 332 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 DYNLRB1Q9NP97 96 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 CISD1Q9NZ45 108 aaKnown RBP6.84□□□□□ -1.31
ATXN3-235ENST00000556082 CACNG5Q9UF02 275 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 PSG11Q9UQ72 335 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 LINC00312Q9Y6C7 94 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 PIEZO1Q92508 2521 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 FAM24AA6NFZ4 105 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 C17orf98A8MV24 154 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 KRBOX1C9JBD0 128 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 WRBO00258 174 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 RAB29O14966 203 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 TXNL1O43396 289 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 SYNGR2O43760 224 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 SSSCA1O60232 199 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 ZG16O60844 167 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 RAMP3O60896 148 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 MED6O75586 246 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 SPP1P10451 314 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 ZNF16P17020 682 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-235ENST00000556082 PPOXP50336 477 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 RAB5CP51148 216 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 ZNF134P52741 427 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 AKR1C2P52895 323 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 RPL23AP62750 156 aaKnown RBP6.83□□□□□ -1.32
ATXN3-235ENST00000556082 BLOC1S1P78537 153 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 NHLH2Q02577 135 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 ZNF266Q14584 549 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 ZNF672Q499Z4 452 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-235ENST00000556082 MIDNQ504T8 468 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 FAM74A1Q5RGS3 127 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 LCE5AQ5TCM9 118 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 FAM53AQ6NSI3 398 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-235ENST00000556082 TCF23Q7RTU1 214 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 TGIF2LYQ8IUE0 185 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 SPAG16Q8N0X2 631 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 STPG2Q8N412 459 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 FAM216BQ8N7L0 139 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 C8orf31Q8N9H6 132 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 ZNF439Q8NDP4 499 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 RNASE11Q8TAA1 199 aaKnown RBP6.83□□□□□ -1.32
ATXN3-235ENST00000556082 TCTEX1D2Q8WW35 142 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 TMED6Q8WW62 240 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 MARC2Q969Z3 335 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 ADTRPQ96IZ2 230 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 C20orf173Q96LM9 149 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 IFI27L2Q9H2X8 130 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 GAL3ST2Q9H3Q3 398 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 WFDC1Q9HC57 220 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-235ENST00000556082 IDI2-AS1Q9NZ38 188 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 SLC25A10Q9UBX3 287 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-235ENST00000556082 HSPB7Q9UBY9 170 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 RPUSD1Q9UJJ7 312 aaKnown RBP6.83□□□□□ -1.32
ATXN3-235ENST00000556082 SESN1Q9Y6P5 492 aa6.83□□□□□ -1.32
ATXN3-235ENST00000556082 PLCE1Q9P212 2302 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 DCHS1Q96JQ0 3298 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 IGHV3-43A0A0B4J1X8 118 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 IGHV1-69-2A0A0G2JMI3 117 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 IGSF23A1L1A6 192 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 LINC00473A8K010 186 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 TEX46H3BTG2 121 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 NDUFB3O43676 98 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 HPRT1P00492 218 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 IGHV3-43DP0DP04 118 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 SELLP14151 372 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 SULT1A1P50225 295 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 CAV2P51636 162 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 MRPS11P82912 194 aaKnown RBP6.82□□□□□ -1.32
ATXN3-235ENST00000556082 PDLIM3Q53GG5 364 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-235ENST00000556082 LRRC10Q5BKY1 277 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 CT45A1Q5HYN5 189 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 TOR2AQ5JU69 321 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 NCR3LG1Q68D85 454 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 ODF3L1Q8IXM7 274 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 ZCCHC24Q8N2G6 241 aaKnown RBP6.82□□□□□ -1.32
ATXN3-235ENST00000556082 MUC15Q8N387 334 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 CT45A3Q8NHU0 189 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 LYPD6BQ8NI32 183 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 DDB2Q92466 427 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 CCL17Q92583 94 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 NEUROG1Q92886 237 aa6.82□□□□□ -1.32
ATXN3-235ENST00000556082 BSCL2Q96G97 398 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-235ENST00000556082 TSNAXQ99598 290 aaKnown RBP6.82□□□□□ -1.32
ATXN3-235ENST00000556082 ABHD14AQ9BUJ0 271 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms