RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 UBAP1Q9NZ09 502 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 USE1Q9NZ43 259 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 DKKL1Q9UK85 242 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 HHLA2Q9UM44 414 aa1.38□□□□□ -2.19
SCFD1-213ENST00000554776 PCNX2A6NKB5 2137 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 DHRS12A0PJE2 317 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 C5orf49A4QMS7 147 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 ODF3BA8MYP8 253 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 EVPLLA8MZ36 301 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 C21orf140B9A014 251 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 UBE2L6O14933 153 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 NIPSNAP2O75323 286 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 APOEP02649 317 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 CSRP1P21291 193 aaKnown RBP1.37□□□□□ -2.19
SCFD1-213ENST00000554776 BLVRBP30043 206 aaPredicted RBP1.37□□□□□ -2.19
SCFD1-213ENST00000554776 TAS2R45P59539 299 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 RPS24P62847 133 aaKnown RBP1.37□□□□□ -2.19
SCFD1-213ENST00000554776 TMEM176BQ3YBM2 270 aaPredicted RBP1.37□□□□□ -2.19
SCFD1-213ENST00000554776 HSP90B2PQ58FF3 399 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 N4BP2L1Q5TBK1 243 aaPredicted RBP1.37□□□□□ -2.19
SCFD1-213ENST00000554776 C1orf195Q5TG92 126 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 AMTNQ6UX39 209 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 SPATA12Q7Z6I5 190 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 Q8N402 240 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 UBL4BQ8N7F7 174 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 OR4C16Q8NGL9 310 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 FNDC9Q8TBE3 224 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.37□□□□□ -2.19
SCFD1-213ENST00000554776 TESCQ96BS2 214 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 ANKRD36BP1Q96IX9 119 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 CCL26Q9Y258 94 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 HMCN1Q96RW7 5635 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 EVC2Q86UK5 1308 aa1.37□□□□□ -2.19
SCFD1-213ENST00000554776 C11orf86A6NJI1 115 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 LRRN3E7EW58 273 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 FNDC10F2Z333 226 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 SLC17A3O00476 420 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 SLC16A4O15374 487 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 MAP2K4P45985 399 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 GABRA4P48169 554 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 KRTAP12-3P60328 96 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 COQ5Q5HYK3 327 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 OR10K2Q6IF99 312 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 SLC51BQ86UW2 128 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 CNEP1R1Q8N9A8 125 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 NAV1Q8NEY1 1877 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 OR2T27Q8NH04 317 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 PIGXQ8TBF5 258 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 RAB2BQ8WUD1 216 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 ZCCHC13Q8WW36 166 aaKnown RBP1.36□□□□□ -2.19
SCFD1-213ENST00000554776 RAB8BQ92930 207 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 C12orf43Q96C57 262 aaKnown RBP1.36□□□□□ -2.19
SCFD1-213ENST00000554776 ARL5BQ96KC2 179 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 MND1Q9BWT6 205 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 CXorf21Q9HAI6 301 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 HRASLSQ9HDD0 168 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 TXNL4BQ9NX01 149 aaKnown RBP1.36□□□□□ -2.19
SCFD1-213ENST00000554776 POLR1DQ9Y2S0 133 aa1.36□□□□□ -2.19
SCFD1-213ENST00000554776 DHX57Q6P158 1386 aaKnown RBP1.35□□□□□ -2.19
SCFD1-213ENST00000554776 ABCC11Q96J66 1382 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 KIF15Q9NS87 1388 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 MYO16Q9Y6X6 1858 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 TRGV4A0A0C4DH28 118 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 OR5K4A6NMS3 321 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 UBFD1O14562 309 aaKnown RBP1.35□□□□□ -2.19
SCFD1-213ENST00000554776 TGOLN2O43493 480 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 MT-CO2P00403 227 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 IGHV1-69P01742 117 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 IL3P08700 152 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 C8orf88P0DMB2 117 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 ALOX5APP20292 161 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 FUSP35637 526 aaKnown RBP eCLIP1.35□□□□□ -2.19
SCFD1-213ENST00000554776 TCL1AP56279 114 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 KRTAP12-4P60329 112 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 BTN3A2P78410 334 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 ITGB3BPQ13352 177 aaPredicted RBP1.35□□□□□ -2.19
SCFD1-213ENST00000554776 EBPQ15125 230 aaKnown RBP1.35□□□□□ -2.19
SCFD1-213ENST00000554776 SS18Q15532 418 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 TNFAIP8L2Q6P589 184 aaPredicted RBP1.35□□□□□ -2.19
SCFD1-213ENST00000554776 LRRN1Q6UXK5 716 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 HIST2H3AQ71DI3 136 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 OR51D1Q8NGF3 324 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 OR2D3Q8NGH3 330 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 MS4A6EQ96DS6 147 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 SFRP2Q96HF1 295 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 STACQ99469 402 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 MIEN1Q9BRT3 115 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 PECRQ9BY49 303 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 TTTY13Q9BZ97 58 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 OR51I1Q9H343 314 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 HES4Q9HCC6 221 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 XPNPEP1Q9NQW7 623 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 COQ4Q9Y3A0 265 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 ARHGAP32A7KAX9 2087 aa1.35□□□□□ -2.19
SCFD1-213ENST00000554776 OR6C6A6NF89 314 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 C17orf51A8MQB3 221 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 P0DMU3 169 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 FAM231AP0DMU4 169 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 FAM231CP0DMU5 169 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 GZMBP10144 247 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms