RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 ALKBH1Q13686 389 aaKnown RBP3.58□□□□□ -1.84
ATXN3-229ENST00000554672 FXYD3Q14802 87 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 ANKRD55Q3KP44 614 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 TP53I3Q53FA7 332 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 NHLRC3Q5JS37 347 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 LY6G6FQ5SQ64 297 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 ATAD3CQ5T2N8 411 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 SYT6Q5T7P8 510 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-229ENST00000554672 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 TRAT1Q6PIZ9 186 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 LINC00596Q86U02 117 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 ODF3L1Q8IXM7 274 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 OR10H4Q8NGA5 316 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 OR10K1Q8NGX5 313 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 OR10AC1Q8NH08 325 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 OR52N1Q8NH53 320 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 OR1L1Q8NH94 360 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 NEK7Q8TDX7 302 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 DYNLRB2Q8TF09 96 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 DNAJC9Q8WXX5 260 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 GHSRQ92847 366 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 YPEL2Q96QA6 119 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 CLCC1Q96S66 551 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 GPER1Q99527 375 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 ABHD14AQ9BUJ0 271 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 FAM107BQ9H098 131 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 METTL9Q9H1A3 318 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 WFDC10AQ9H1F0 79 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 ZC4H2Q9NQZ6 224 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 METTL1Q9UBP6 276 aaKnown RBP3.58□□□□□ -1.84
ATXN3-229ENST00000554672 GNG8Q9UK08 70 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 TRAPPC2LQ9UL33 140 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 ING4Q9UNL4 249 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 GAB2Q9UQC2 676 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 LRRC42Q9Y546 428 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 GMPPBQ9Y5P6 360 aa3.58□□□□□ -1.84
ATXN3-229ENST00000554672 ABCA13Q86UQ4 5058 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 OR5H14A6NHG9 310 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 OR4C45A6NMZ5 311 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 H7C2Y5 167 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 GABRPO00591 440 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 GEMIN2O14893 280 aaKnown RBP3.57□□□□□ -1.84
ATXN3-229ENST00000554672 ZNF780AO75290 641 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-229ENST00000554672 CA11O75493 328 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 CA2P00918 260 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 TRBV12-3P01733 135 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 HTR1AP08908 422 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 CT45A6P0DMU7 189 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 CT45A5P0DMU8 189 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 CT45A7P0DMV0 189 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 FOLR2P14207 255 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 RAB3AP20336 220 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 EPHA2P29317 976 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 OR3A3P47888 321 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 LGALS7P47929 136 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 APOC4P55056 127 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 RBM11P57052 281 aaKnown RBP3.57□□□□□ -1.84
ATXN3-229ENST00000554672 RPS16P62249 146 aaKnown RBP3.57□□□□□ -1.84
ATXN3-229ENST00000554672 ADARB1P78563 741 aaKnown RBP3.57□□□□□ -1.84
ATXN3-229ENST00000554672 HTD2P86397 168 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 ZNF85Q03923 595 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 PSG5Q15238 335 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 RBMS2Q15434 407 aaKnown RBP3.57□□□□□ -1.84
ATXN3-229ENST00000554672 MPV17LQ2QL34 196 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 DNAL1Q4LDG9 190 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 KIAA2026Q5HYC2 2103 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 C6orf141Q5SZD1 244 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 C10orf25Q5T742 122 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 VPS13DQ5THJ4 4388 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 FAM71F2Q6NXP2 309 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 ZNF554Q86TJ5 538 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 HS3ST5Q8IZT8 346 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 GAPTQ8N292 157 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 PARP16Q8N5Y8 322 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 OR52L2PQ8NGH6 319 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 OR51A4Q8NGJ6 313 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 OR52B4Q8NGK2 314 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 OR4K15Q8NH41 348 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 C2CD4CQ8TF44 421 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 CANT1Q8WVQ1 401 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 THRSPQ92748 146 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 RNF183Q96D59 192 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 IL4I1Q96RQ9 567 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 S100A13Q99584 98 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 TSNAXQ99598 290 aaKnown RBP3.57□□□□□ -1.84
ATXN3-229ENST00000554672 MFFQ9GZY8 342 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 PARP12Q9H0J9 701 aaKnown RBP3.57□□□□□ -1.84
ATXN3-229ENST00000554672 TAF9BQ9HBM6 251 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 SPACA1Q9HBV2 294 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 PAK1IP1Q9NWT1 392 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-229ENST00000554672 IL36GQ9NZH8 169 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 KCNIP1Q9NZI2 227 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 ZNF581Q9P0T4 197 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 PIPOXQ9P0Z9 390 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 ENOPH1Q9UHY7 261 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 JPT1Q9UK76 154 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 POMPQ9Y244 141 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 HECTD4Q9Y4D8 3996 aa3.57□□□□□ -1.84
ATXN3-229ENST00000554672 DSCAML1Q8TD84 2053 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 SAA2-SAA4A0A096LPE2 208 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms