RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 CMTM3Q96MX0 182 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 RNF5Q99942 180 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 HSPB9Q9BQS6 159 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 SLIRPQ9GZT3 109 aaKnown RBP6.85□□□□□ -1.31
ACTN1-213ENST00000554508 TOLLIPQ9H0E2 274 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 ADAM30Q9UKF2 790 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 ELF5Q9UKW6 265 aaPredicted RBP6.85□□□□□ -1.31
ACTN1-213ENST00000554508 MRPS7Q9Y2R9 242 aaKnown RBP6.85□□□□□ -1.31
ACTN1-213ENST00000554508 H0YJW9 148 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 CTDSP2O14595 271 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 NDUFA3O95167 84 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 DIRAS3O95661 229 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 PRB2P02812 416 aaPredicted RBP6.84□□□□□ -1.31
ACTN1-213ENST00000554508 RPLP1P05386 114 aaKnown RBP6.84□□□□□ -1.31
ACTN1-213ENST00000554508 FCGR3AP08637 254 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 PTHLHP12272 177 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 CNTFRP26992 372 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 PSMB8P28062 276 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 TAS2R20P59543 309 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 PITPNAQ00169 270 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 KIR2DS1Q14954 304 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 SRSF7Q16629 238 aaKnown RBP eCLIP6.84□□□□□ -1.313e-14■■■■□ 24.7
ACTN1-213ENST00000554508 RPL39P5Q59GN2 51 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 FAM131AQ6UXB0 335 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 ETV3LQ6ZN32 361 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 C18orf65Q6ZTR6 163 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 OR5AN1Q8NGI8 311 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 MRAPQ8TCY5 172 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 NUDCD2Q8WVJ2 157 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 MAFIPQ8WZ33 124 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 P2RX4Q99571 388 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 ST6GALNAC5Q9BVH7 336 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 OR51J1Q9H342 316 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 AUNIPQ9H7T9 357 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.84□□□□□ -1.31
ACTN1-213ENST00000554508 AURKAIP1Q9NWT8 199 aaPredicted RBP6.84□□□□□ -1.31
ACTN1-213ENST00000554508 OR1A1Q9P1Q5 309 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 EXTL2Q9UBQ6 330 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 ZNF230Q9UIE0 474 aaPredicted RBP6.84□□□□□ -1.31
ACTN1-213ENST00000554508 ZNF221Q9UK13 617 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 WASHC3Q9Y3C0 194 aa6.84□□□□□ -1.31
ACTN1-213ENST00000554508 TRBV6-7A0A0A0MS04 114 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 IGHV7-81A0A0B4J1V7 117 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 IGKV1-6A0A0C4DH72 117 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 MEIS3P1A6NDR6 274 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 H7C2Y5 167 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 CCL24O00175 119 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 RRHO14718 337 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 FABP7O15540 132 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 SSX5O60225 188 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 PPIFP30405 207 aaKnown RBP6.83□□□□□ -1.32
ACTN1-213ENST00000554508 ZNF660Q6AZW8 331 aaPredicted RBP6.83□□□□□ -1.32
ACTN1-213ENST00000554508 CNIH2Q6PI25 160 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 TMEM65Q6PI78 240 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 Q6ZS49 121 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 SNX29P2Q8IUI4 249 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 TCTEX1D1Q8N7M0 179 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.83□□□□□ -1.32
ACTN1-213ENST00000554508 OR8U1Q8NH10 309 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 OR10J5Q8NHC4 309 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 DPF1Q92782 380 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 RBMXL1Q96E39 390 aaKnown RBP6.83□□□□□ -1.32
ACTN1-213ENST00000554508 RAX2Q96IS3 184 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 CABLES2Q9BTV7 478 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 PARP12Q9H0J9 701 aaKnown RBP6.83□□□□□ -1.32
ACTN1-213ENST00000554508 MIXL1Q9H2W2 232 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 RDH8Q9NYR8 311 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 ZMAT5Q9UDW3 170 aaKnown RBP6.83□□□□□ -1.32
ACTN1-213ENST00000554508 RNF150Q9ULK6 438 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 GAB2Q9UQC2 676 aa6.83□□□□□ -1.32
ACTN1-213ENST00000554508 TRAV41A0A0B4J266 112 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 A6NHS1 94 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 ATP6V0E1O15342 81 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 PROP1O75360 226 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 IGLV1-40P01703 118 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 APOA2P02652 100 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 FCER2P06734 321 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 GSTT2P0CG29 244 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 GSTT2BP0CG30 244 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 DTYMKP23919 212 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 S100A5P33763 92 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 PRSS3P35030 304 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 CRIP2P52943 208 aaPredicted RBP6.82□□□□□ -1.32
ACTN1-213ENST00000554508 TAGLNQ01995 201 aaKnown RBP6.82□□□□□ -1.32
ACTN1-213ENST00000554508 EGFEM1PQ0D2K5 195 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 TMEM267Q0VDI3 215 aaPredicted RBP6.82□□□□□ -1.32
ACTN1-213ENST00000554508 PLGLAQ15195 96 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 GLDNQ6ZMI3 551 aaPredicted RBP6.82□□□□□ -1.32
ACTN1-213ENST00000554508 LCNL1Q6ZST4 164 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 PDPNQ86YL7 162 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 MINDY2Q8NBR6 621 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 C4orf3Q8WVX3 66 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 DIRAS2Q96HU8 199 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 UBE2E2Q96LR5 201 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 TSNAXQ99598 290 aaKnown RBP6.82□□□□□ -1.32
ACTN1-213ENST00000554508 NXF2Q9GZY0 626 aaKnown RBP6.82□□□□□ -1.32
ACTN1-213ENST00000554508 FBXL15Q9H469 300 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 IFT46Q9NQC8 304 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 PARP11Q9NR21 331 aa6.82□□□□□ -1.32
ACTN1-213ENST00000554508 WSB1Q9Y6I7 421 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms