RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 A0A0J9YY10 115 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 EXOC1LA0A1B0GW35 172 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 A0A1B0GX78 115 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 A0A1W2PRE2 83 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 C20orf202A1L168 122 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 ISPDA4D126 451 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 F6UB75 175 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 H0YJW9 148 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 I3L4J1 428 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 K7ERU9 68 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 LGALS9O00182 355 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 CORTO00230 105 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 SLC17A3O00476 420 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 GYG2O15488 501 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 RAD51CO43502 376 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 MFSD11O43934 449 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 EIF4E2O60573 245 aaKnown RBP1.45□□□□□ -2.18
VRK1-202ENST00000553683 ALOX12BO75342 701 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 LIMS3P0CW19 117 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 LIMS4P0CW20 117 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 OR5H8P0DN80 308 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 OR13C7P0DN81 318 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 HTR1DP28221 377 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 TNFSF9P41273 254 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 AQP5P55064 265 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 CLDN6P56747 220 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 TAS2R31P59538 309 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 KRTAP12-3P60328 96 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 RPS28P62857 69 aaKnown RBP1.45□□□□□ -2.18
VRK1-202ENST00000553683 PPP3R1P63098 170 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 SLC35B1P78383 322 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 CRADDP78560 199 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 DCDP81605 110 aaKnown RBP1.45□□□□□ -2.18
VRK1-202ENST00000553683 RHOGP84095 191 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 PLCXD2Q0VAA5 305 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 EDDM3AQ14507 147 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 ARHGAP11BQ3KRB8 267 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 TMEM97Q5BJF2 176 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 CLLU1Q5K131 121 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 FAM162BQ5T6X4 162 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 STEAP4Q687X5 459 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 KDM4DQ6B0I6 523 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 UGT2A3Q6UWM9 527 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 TOMM20LQ6UXN7 152 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 WDR82Q6UXN9 313 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 TMPPEQ6ZT21 453 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 FAM19A5Q7Z5A7 132 aaPredicted RBP1.45□□□□□ -2.18
VRK1-202ENST00000553683 C10orf107Q8IVU9 208 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 BAP18Q8IXM2 172 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 CA13Q8N1Q1 262 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 UMODL1-AS1Q8N2C9 162 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 ATPAF2Q8N5M1 289 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 TMEM86BQ8N661 226 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 EID2Q8N6I1 236 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 UBAC2Q8NBM4 344 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 CHST4Q8NCG5 386 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 SLC30A7Q8NEW0 376 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 OR4D11Q8NGI4 311 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 OR4C13Q8NGP0 309 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 ZNRF2Q8NHG8 242 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 TERB2Q8NHR7 220 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 SLC7A13Q8TCU3 470 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 SFXN5Q8TD22 340 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 RBPMSQ93062 196 aaKnown RBP1.45□□□□□ -2.18
VRK1-202ENST00000553683 PTX4Q96A99 478 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 CCDC126Q96EE4 140 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 TVP23CQ96ET8 276 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 IMP4Q96G21 291 aaKnown RBP1.45□□□□□ -2.18
VRK1-202ENST00000553683 SMARCD1Q96GM5 515 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 CAPZA3Q96KX2 299 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 CNBD2Q96M20 576 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 SIGMAR1Q99720 223 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 APOL4Q9BPW4 351 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 GINS3Q9BRX5 216 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 C1orf50Q9BV19 199 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 PECRQ9BY49 303 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 ABCG5Q9H222 651 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 MAP1LC3AQ9H492 121 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 CST9LQ9H4G1 147 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 RNF122Q9H9V4 155 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 ACP6Q9NPH0 428 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 FBXO6Q9NRD1 293 aaPredicted RBP1.45□□□□□ -2.18
VRK1-202ENST00000553683 C14orf105Q9NVL8 296 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 TMEM38BQ9NVV0 291 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 MED29Q9NX70 200 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 CALML5Q9NZT1 146 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 PRO0628Q9UI54 55 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 C14orf166Q9Y224 244 aaKnown RBP1.45□□□□□ -2.18
VRK1-202ENST00000553683 CARHSP1Q9Y2V2 147 aaKnown RBP1.45□□□□□ -2.18
VRK1-202ENST00000553683 NOS1P29475 1434 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 CEP152O94986 1710 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 POLR1AO95602 1720 aaPredicted RBP1.45□□□□□ -2.18
VRK1-202ENST00000553683 ARHGEF28Q8N1W1 1705 aaKnown RBP1.45□□□□□ -2.18
VRK1-202ENST00000553683 EHBP1L1Q8N3D4 1523 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 KDM5DQ9BY66 1539 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 ARHGEF12Q9NZN5 1544 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 TET3O43151 1660 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 CAMSAP2Q08AD1 1489 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 WDFY4Q6ZS81 3184 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 SPHKAPQ2M3C7 1700 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms