RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 SLC26A10Q8NG04 563 aa2.72□□□□□ -1.97
ATXN3-217ENST00000553287 OR11H1Q8NG94 326 aa2.72□□□□□ -1.97
ATXN3-217ENST00000553287 CASTOR1Q8WTX7 329 aa2.72□□□□□ -1.97
ATXN3-217ENST00000553287 CAPSLQ8WWF8 208 aa2.72□□□□□ -1.97
ATXN3-217ENST00000553287 PIGCQ92535 297 aa2.72□□□□□ -1.97
ATXN3-217ENST00000553287 SGK3Q96BR1 496 aa2.72□□□□□ -1.97
ATXN3-217ENST00000553287 MALSU1Q96EH3 234 aa2.72□□□□□ -1.97
ATXN3-217ENST00000553287 RBM14Q96PK6 669 aaKnown RBP2.72□□□□□ -1.97
ATXN3-217ENST00000553287 PAIP2Q9BPZ3 127 aaKnown RBP2.72□□□□□ -1.97
ATXN3-217ENST00000553287 PARD6BQ9BYG5 372 aa2.72□□□□□ -1.97
ATXN3-217ENST00000553287 HDHD2Q9H0R4 259 aa2.72□□□□□ -1.97
ATXN3-217ENST00000553287 TMEM231Q9H6L2 316 aa2.72□□□□□ -1.97
ATXN3-217ENST00000553287 MRPL22Q9NWU5 206 aaKnown RBP2.72□□□□□ -1.97
ATXN3-217ENST00000553287 THUMPD1Q9NXG2 353 aaKnown RBP2.72□□□□□ -1.97
ATXN3-217ENST00000553287 TAS2R1Q9NYW7 299 aa2.72□□□□□ -1.97
ATXN3-217ENST00000553287 CCDC167Q9P0B6 97 aa2.72□□□□□ -1.97
ATXN3-217ENST00000553287 B9D1Q9UPM9 204 aa2.72□□□□□ -1.97
ATXN3-217ENST00000553287 PSG11Q9UQ72 335 aa2.72□□□□□ -1.97
ATXN3-217ENST00000553287 KIAA2026Q5HYC2 2103 aa2.72□□□□□ -1.97
ATXN3-217ENST00000553287 MUC2Q02817 5179 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 A0A087WUU8 490 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 IGHV2-26A0A0B4J1V2 119 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 GMNCA6NCL1 334 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 A6NIN4 97 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 A6NIZ1 184 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 FAM74A7A6NL05 159 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 ANKRD30BLA7E2S9 258 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 C17orf98A8MV24 154 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 ZNF705EA8MWA4 302 aaPredicted RBP2.71□□□□□ -1.98
ATXN3-217ENST00000553287 FCN1O00602 326 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 FFAR1O14842 300 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 OR2F2O95006 317 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 CD14P08571 375 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 IGHV1-8P0DP01 117 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 ZNF44P15621 663 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 PAICSP22234 425 aaKnown RBP2.71□□□□□ -1.98
ATXN3-217ENST00000553287 CNTFRP26992 372 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 NAA10P41227 235 aaPredicted RBP2.71□□□□□ -1.98
ATXN3-217ENST00000553287 RBM34P42696 430 aaKnown RBP2.71□□□□□ -1.98
ATXN3-217ENST00000553287 RAP1BP61224 184 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 HERVK_113P61574 105 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 RAP1AP62834 184 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 CBX1P83916 185 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 BDH1Q02338 343 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 GABPB1Q06547 395 aaPredicted RBP2.71□□□□□ -1.98
ATXN3-217ENST00000553287 PRDX4Q13162 271 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 HES1Q14469 280 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 EDDM3AQ14507 147 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 FAM74A3Q4VXF1 159 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 FAM27D1Q5T7N8 215 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 PRAMEF5Q5TYX0 476 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 DCXRQ7Z4W1 244 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 ZNF429Q86V71 674 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 STPG2Q8N412 459 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 ZNF676Q8N7Q3 588 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 OR11H6Q8NGC7 330 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 OR4P4Q8NGL7 312 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 OR13D1Q8NGV5 346 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 OR4K13Q8NH42 304 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 OR5K1Q8NHB7 308 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 TRMT10AQ8TBZ6 339 aaKnown RBP2.71□□□□□ -1.98
ATXN3-217ENST00000553287 ARPC1AQ92747 370 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 LEAP2Q969E1 77 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 C12orf43Q96C57 262 aaKnown RBP2.71□□□□□ -1.98
ATXN3-217ENST00000553287 REEP6Q96HR9 211 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 TPD52L3Q96J77 140 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 RNF170Q96K19 258 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 NSMCE2Q96MF7 247 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 NMNAT3Q96T66 252 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 TMED9Q9BVK6 235 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 POLR2J2Q9GZM3 115 aaKnown RBP2.71□□□□□ -1.98
ATXN3-217ENST00000553287 CHST6Q9GZX3 395 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 SLC22A4Q9H015 551 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 MAGT1Q9H0U3 335 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 POLR2J3Q9H1A7 115 aaKnown RBP2.71□□□□□ -1.98
ATXN3-217ENST00000553287 WFDC10AQ9H1F0 79 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 TLNRD1Q9H1K6 362 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 C1orf21Q9H246 121 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 TMEM38AQ9H6F2 299 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 NMNAT1Q9HAN9 279 aaPredicted RBP2.71□□□□□ -1.98
ATXN3-217ENST00000553287 RPRD1BQ9NQG5 326 aaKnown RBP2.71□□□□□ -1.98
ATXN3-217ENST00000553287 USE1Q9NZ43 259 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 STX18Q9P2W9 335 aaKnown RBP2.71□□□□□ -1.98
ATXN3-217ENST00000553287 ZMAT5Q9UDW3 170 aaKnown RBP2.71□□□□□ -1.98
ATXN3-217ENST00000553287 TBL2Q9Y4P3 447 aaKnown RBP2.71□□□□□ -1.98
ATXN3-217ENST00000553287 DNAH2Q9P225 4427 aa2.71□□□□□ -1.98
ATXN3-217ENST00000553287 DSCAML1Q8TD84 2053 aa2.7□□□□□ -1.98
ATXN3-217ENST00000553287 FAT2Q9NYQ8 4349 aa2.7□□□□□ -1.98
ATXN3-217ENST00000553287 MUC4Q99102 2169 aa2.7□□□□□ -1.98
ATXN3-217ENST00000553287 IGHV3-72A0A0B4J1Y9 119 aa2.7□□□□□ -1.98
ATXN3-217ENST00000553287 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
ATXN3-217ENST00000553287 RNF222A6NCQ9 220 aa2.7□□□□□ -1.98
ATXN3-217ENST00000553287 EVPLLA8MZ36 301 aa2.7□□□□□ -1.98
ATXN3-217ENST00000553287 UBDO15205 165 aa2.7□□□□□ -1.98
ATXN3-217ENST00000553287 SNAPINO95295 136 aa2.7□□□□□ -1.98
ATXN3-217ENST00000553287 GYPBP06028 91 aa2.7□□□□□ -1.98
ATXN3-217ENST00000553287 PGA5P0DJD9 388 aa2.7□□□□□ -1.98
ATXN3-217ENST00000553287 ZNF728P0DKX0 622 aa2.7□□□□□ -1.98
ATXN3-217ENST00000553287 TROVE2P10155 538 aaKnown RBP eCLIP2.7□□□□□ -1.98
ATXN3-217ENST00000553287 ANXA3P12429 323 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms