RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 BTN1A1Q13410 526 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 GUCA2BQ16661 112 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 LRRC10Q5BKY1 277 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 NHLRC3Q5JS37 347 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 SBSNQ6UWP8 590 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 FAM19A3Q7Z5A8 133 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 PRNTQ86SH4 94 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 ZNF615Q8N8J6 731 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 LY6G5BQ8NDX9 201 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 PTX4Q96A99 478 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 PLEKHB2Q96CS7 222 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 SAMD10Q9BYL1 202 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 CHST6Q9GZX3 395 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 ZNF331Q9NQX6 463 aaPredicted RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 FAM49BQ9NUQ9 324 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 CALML5Q9NZT1 146 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 PXMP4Q9Y6I8 212 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 VIRMAQ69YN4 1812 aaKnown RBP3.13□□□□□ -1.91
USP44-208ENST00000552440 WDR81Q562E7 1941 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 TMEM131LA2VDJ0 1609 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 A0A096LPI6 279 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 TRAV8-1A0A0A6YYK1 113 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 A0A1B0GX51 115 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 J3KT08 172 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 AIPO00170 330 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 GYG2O15488 501 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 TCF21O43680 179 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 ANGPTL7O43827 346 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 IGF2P01344 180 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 HLA-DRB1P01911 266 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 DBIP07108 87 aaKnown RBP3.13□□□□□ -1.91
USP44-208ENST00000552440 CHTF8P0CG12 524 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 OR12D1P0DN82 309 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 ZNF25P17030 456 aaPredicted RBP3.13□□□□□ -1.91
USP44-208ENST00000552440 ORM2P19652 201 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 GATA2P23769 480 aaPredicted RBP3.13□□□□□ -1.91
USP44-208ENST00000552440 BLVRBP30043 206 aaPredicted RBP3.13□□□□□ -1.91
USP44-208ENST00000552440 HSPA9P38646 679 aaKnown RBP3.13□□□□□ -1.91
USP44-208ENST00000552440 KLF3P57682 345 aaPredicted RBP3.13□□□□□ -1.91
USP44-208ENST00000552440 GRB2P62993 217 aaKnown RBP3.13□□□□□ -1.91
USP44-208ENST00000552440 EMX2Q04743 252 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 C12orf74Q32Q52 190 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 PRR30Q53SZ7 412 aaPredicted RBP3.13□□□□□ -1.91
USP44-208ENST00000552440 NXNL2Q5VZ03 156 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 ARL9Q6T311 187 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 ACP7Q6ZNF0 438 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 DRAM1Q8N682 238 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 ANKRD29Q8N6D5 301 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 OR51H1Q8NH63 302 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 OR5P3Q8WZ94 311 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 GPR146Q96CH1 333 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 GPR82Q96P67 336 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 OR5M11Q96RB7 305 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 ZNF649Q9BS31 505 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 SLC25A2Q9BXI2 301 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 TBL1XR1Q9BZK7 514 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 PARP11Q9NR21 331 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 LINC00527Q9UJ94 153 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 PYGO1Q9Y3Y4 419 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 PCYT1BQ9Y5K3 369 aaPredicted RBP3.13□□□□□ -1.91
USP44-208ENST00000552440 RTL1A6NKG5 1358 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 SPEF2Q9C093 1822 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 ADGRL2O95490 1459 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 PXDNQ92626 1479 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 IGSF9BQ9UPX0 1349 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 TNS2Q63HR2 1409 aa3.13□□□□□ -1.91
USP44-208ENST00000552440 NEXMIFQ5QGS0 1516 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 TNS1Q9HBL0 1735 aaKnown RBP3.12□□□□□ -1.91
USP44-208ENST00000552440 MARF1Q9Y4F3 1742 aaKnown RBP3.12□□□□□ -1.91
USP44-208ENST00000552440 BAZ2AQ9UIF9 1905 aaKnown RBP3.12□□□□□ -1.91
USP44-208ENST00000552440 TRAV36DV7A0A075B6V5 113 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 CCL15-CCL14A0A0B4J2E2 113 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 C5orf63A6NC05 138 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 CD300LBA8K4G0 201 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 F5H5P2 479 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 TMEM250H0YL14 139 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 M0R1X1 148 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 PEX7O00628 323 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 DUSP14O95147 198 aaKnown RBP3.12□□□□□ -1.91
USP44-208ENST00000552440 CSN2P05814 226 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 ZSCAN5DPP0CG00 497 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 RPL7P18124 248 aaKnown RBP3.12□□□□□ -1.91
USP44-208ENST00000552440 RPL23P62829 140 aaKnown RBP3.12□□□□□ -1.91
USP44-208ENST00000552440 RUNX3Q13761 415 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 CCL15Q16663 113 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 ABCA11PQ4W5N1 156 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 TCEAL5Q5H9L2 206 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 UBE2NLQ5JXB2 153 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 IBA57Q5T440 356 aaKnown RBP3.12□□□□□ -1.91
USP44-208ENST00000552440 ADAMTSL4-AS1Q5T5F5 129 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 GLYATQ6IB77 296 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 SHISA6Q6ZSJ9 500 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 Q6ZSR6 202 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 TMUB2Q71RG4 321 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 TMEM75Q8N9X5 138 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 DCAF4L2Q8NA75 395 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 OR1L1Q8NH94 360 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 TWIST2Q8WVJ9 160 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 RPUSD4Q96CM3 377 aaKnown RBP3.12□□□□□ -1.91
USP44-208ENST00000552440 STARD4Q96DR4 205 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms