RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 OR11H2Q8NH07 326 aa10.56□□□□□ -0.72
VPS29-209ENST00000551655 OR5AK2Q8NH90 309 aa10.56□□□□□ -0.72
VPS29-209ENST00000551655 DNAJC9Q8WXX5 260 aa10.56□□□□□ -0.72
VPS29-209ENST00000551655 JAM3Q9BX67 310 aa10.56□□□□□ -0.72
VPS29-209ENST00000551655 IGLV2-18A0A075B6J9 118 aa10.55□□□□□ -0.72
VPS29-209ENST00000551655 TRBV9A0A0B4J1U6 114 aa10.55□□□□□ -0.72
VPS29-209ENST00000551655 RPSAP08865 295 aaKnown RBP10.55□□□□□ -0.72
VPS29-209ENST00000551655 ZNF124Q15973 351 aa10.55□□□□□ -0.72
VPS29-209ENST00000551655 C15orf32Q32M92 178 aa10.55□□□□□ -0.72
VPS29-209ENST00000551655 RBPMS2Q6ZRY4 209 aaKnown RBP10.55□□□□□ -0.72
VPS29-209ENST00000551655 AGMATQ9BSE5 352 aa10.55□□□□□ -0.72
VPS29-209ENST00000551655 RIBC2Q9H4K1 309 aa10.55□□□□□ -0.72
VPS29-209ENST00000551655 STEAP1Q9UHE8 339 aa10.55□□□□□ -0.72
VPS29-209ENST00000551655 MPPED1O15442 326 aa10.54□□□□□ -0.72
VPS29-209ENST00000551655 SLC25A30Q5SVS4 291 aa10.54□□□□□ -0.72
VPS29-209ENST00000551655 UNQ9165/PRO28630Q6UXU0 137 aa10.54□□□□□ -0.72
VPS29-209ENST00000551655 PDPNQ86YL7 162 aa10.54□□□□□ -0.72
VPS29-209ENST00000551655 GPHB5Q86YW7 130 aa10.54□□□□□ -0.72
VPS29-209ENST00000551655 POM121L12Q8N7R1 296 aa10.54□□□□□ -0.72
VPS29-209ENST00000551655 FAM107BQ9H098 131 aa10.54□□□□□ -0.72
VPS29-209ENST00000551655 PAK1IP1Q9NWT1 392 aaPredicted RBP10.54□□□□□ -0.72
VPS29-209ENST00000551655 OR1A1Q9P1Q5 309 aa10.54□□□□□ -0.72
VPS29-209ENST00000551655 TMEM212A6NML5 194 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 A8MWP6 167 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 ZNF780AO75290 641 aaPredicted RBP10.53□□□□□ -0.72
VPS29-209ENST00000551655 FKBP6O75344 327 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 CA11O75493 328 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 GPX5O75715 221 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 T-ENOLP0DO92 83 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 ARL3P36405 182 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 TNXAQ16473 311 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 ZNF585BQ52M93 769 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 CLEC19AQ6UXS0 136 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 Q6ZTC4 211 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 ZNF554Q86TJ5 538 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 LHFPL3Q86UP9 236 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 APRG1Q8IVJ8 170 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 SLC38A6Q8IZM9 456 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 MUL1Q969V5 352 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 ASB9Q96DX5 294 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 CCDC140Q96MF4 163 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 OR14A2Q96R54 314 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 ZNF184Q99676 751 aaPredicted RBP10.53□□□□□ -0.72
VPS29-209ENST00000551655 SULT4A1Q9BR01 284 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 SELENOIQ9C0D9 397 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 C11orf54Q9H0W9 315 aaPredicted RBP10.53□□□□□ -0.72
VPS29-209ENST00000551655 TMEM138Q9NPI0 162 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 SLC35D1Q9NTN3 355 aa10.53□□□□□ -0.72
VPS29-209ENST00000551655 TRAV25A0A0B4J276 109 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 FAM90A7PA6NKC0 464 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 SRRM4A7MD48 611 aaKnown RBP10.52□□□□□ -0.73
VPS29-209ENST00000551655 B2RBV5 119 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 APOA2P02652 100 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 FUT3P21217 361 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 BDKRB2P30411 391 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 GTF2A1P52655 376 aaPredicted RBP10.52□□□□□ -0.73
VPS29-209ENST00000551655 TMED1Q13445 227 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 RBMY1FQ15415 496 aaKnown RBP10.52□□□□□ -0.73
VPS29-209ENST00000551655 LGALS9BQ3B8N2 356 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 C10orf55Q5SWW7 151 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 GLIPR1L1Q6UWM5 242 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 IDO2Q6ZQW0 420 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 NECAP1Q8NC96 275 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 CD300LFQ8TDQ1 290 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 SRSF12Q8WXF0 261 aaKnown RBP10.52□□□□□ -0.73
VPS29-209ENST00000551655 GALNT14Q96FL9 552 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 HARBI1Q96MB7 349 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 SCRT1Q9BWW7 348 aa10.52□□□□□ -0.73
VPS29-209ENST00000551655 EXOSC1Q9Y3B2 195 aaKnown RBP10.52□□□□□ -0.73
VPS29-209ENST00000551655 C11orf94C9JXX5 98 aa10.51□□□□□ -0.73
VPS29-209ENST00000551655 PPP3R1P63098 170 aa10.51□□□□□ -0.73
VPS29-209ENST00000551655 MED22Q15528 200 aa10.51□□□□□ -0.73
VPS29-209ENST00000551655 PVRIGQ6DKI7 326 aa10.51□□□□□ -0.73
VPS29-209ENST00000551655 OR4A5Q8NH83 315 aa10.51□□□□□ -0.73
VPS29-209ENST00000551655 RFKQ969G6 155 aa10.51□□□□□ -0.73
VPS29-209ENST00000551655 NRBF2Q96F24 287 aa10.51□□□□□ -0.73
VPS29-209ENST00000551655 CSTL1Q9H114 145 aa10.51□□□□□ -0.73
VPS29-209ENST00000551655 ABRACLQ9P1F3 81 aa10.51□□□□□ -0.73
VPS29-209ENST00000551655 GMPPBQ9Y5P6 360 aa10.51□□□□□ -0.73
VPS29-209ENST00000551655 IGHV3-35A0A0C4DH35 117 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 MPTX1A8MV57 137 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 M0R1X1 148 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 MGMTP16455 207 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 HLA-DMBP28068 263 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 TAGLNQ01995 201 aaKnown RBP10.5□□□□□ -0.73
VPS29-209ENST00000551655 FAM106AQ4KMX7 169 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 Q6ZR54 194 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 SVOPQ8N4V2 548 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 ACBD7Q8N6N7 88 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 OR8J1Q8NGP2 316 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 OR13C5Q8NGS8 318 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 SETD6Q8TBK2 473 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 ACOT12Q8WYK0 555 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 Q96M66 194 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 SPAG8Q99932 426 aaPredicted RBP10.5□□□□□ -0.73
VPS29-209ENST00000551655 CHRDL1Q9BU40 450 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 AASSQ9UDR5 926 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 MYCBP2O75592 4640 aa10.5□□□□□ -0.73
VPS29-209ENST00000551655 AQP12BA6NM10 295 aa10.49□□□□□ -0.73
VPS29-209ENST00000551655 PDCD6O75340 191 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms