RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 DDB2Q92466 427 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 LEAP2Q969E1 77 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 R3HDM4Q96D70 268 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 TSNAXQ99598 290 aaKnown RBP9.49□□□□□ -0.89
RAB5C-208ENST00000551338 ATP5SQ99766 215 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 ZNF251Q9BRH9 671 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 HRH4Q9H3N8 390 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 C19orf12Q9NSK7 152 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 CTSZQ9UBR2 303 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 SLC25A10Q9UBX3 287 aaPredicted RBP9.49□□□□□ -0.89
RAB5C-208ENST00000551338 NDRG3Q9UGV2 375 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 LINC00312Q9Y6C7 94 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 ZFHX4Q86UP3 3567 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 ANKRD11Q6UB99 2663 aaPredicted RBP9.48□□□□□ -0.89
RAB5C-208ENST00000551338 hADV38S2A0JD32 116 aa9.48□□□□□ -0.89
RAB5C-208ENST00000551338 RBFOX2O43251 390 aaKnown RBP eCLIP9.48□□□□□ -0.89
RAB5C-208ENST00000551338 C1QL1O75973 258 aa9.48□□□□□ -0.89
RAB5C-208ENST00000551338 OR9G9P0C7N8 305 aa9.48□□□□□ -0.89
RAB5C-208ENST00000551338 NDUFB7P17568 137 aa9.48□□□□□ -0.89
RAB5C-208ENST00000551338 UBE2KP61086 200 aa9.48□□□□□ -0.89
RAB5C-208ENST00000551338 TNFRSF9Q07011 255 aa9.48□□□□□ -0.89
RAB5C-208ENST00000551338 PRAMEF5Q5TYX0 476 aa9.48□□□□□ -0.89
RAB5C-208ENST00000551338 TMEM182Q6ZP80 229 aaPredicted RBP9.48□□□□□ -0.89
RAB5C-208ENST00000551338 H2BFWTQ7Z2G1 175 aa9.48□□□□□ -0.89
RAB5C-208ENST00000551338 STX12Q86Y82 276 aa9.48□□□□□ -0.89
RAB5C-208ENST00000551338 ZNF525Q8N782 197 aa9.48□□□□□ -0.89
RAB5C-208ENST00000551338 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.48□□□□□ -0.89
RAB5C-208ENST00000551338 MS4A7Q9GZW8 240 aaPredicted RBP9.48□□□□□ -0.89
RAB5C-208ENST00000551338 MS4A5Q9H3V2 200 aa9.48□□□□□ -0.89
RAB5C-208ENST00000551338 RPUSD1Q9UJJ7 312 aaKnown RBP9.48□□□□□ -0.89
RAB5C-208ENST00000551338 STRAPQ9Y3F4 350 aaKnown RBP9.48□□□□□ -0.89
RAB5C-208ENST00000551338 SAA2-SAA4A0A096LPE2 208 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 TMEM218A2RU14 115 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 MARCH11A6NNE9 402 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 TMPRSS2O15393 492 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 FCGR3BO75015 233 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 DFFBO76075 338 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 HPRT1P00492 218 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 METTL15P1P0C7V9 234 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 SAA2P0DJI9 122 aaPredicted RBP9.47□□□□□ -0.89
RAB5C-208ENST00000551338 ADCYAP1P18509 176 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 KIR2DS2P43631 304 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 CAMLGP49069 296 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 F2RL1P55085 397 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 AKR1C1Q04828 323 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 MEF2CQ06413 473 aaPredicted RBP9.47□□□□□ -0.89
RAB5C-208ENST00000551338 TMEM14EPQ6UXP3 125 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 OR2G3Q8NGZ4 309 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 CD300LFQ8TDQ1 290 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 CCL17Q92583 94 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 OR4C12Q96R67 309 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 TMEM231Q9H6L2 316 aa9.47□□□□□ -0.89
RAB5C-208ENST00000551338 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.47□□□□□ -0.89
RAB5C-208ENST00000551338 CISD1Q9NZ45 108 aaKnown RBP9.47□□□□□ -0.89
RAB5C-208ENST00000551338 PPIHO43447 177 aaKnown RBP9.46□□□□□ -0.9
RAB5C-208ENST00000551338 ZG16O60844 167 aa9.46□□□□□ -0.9
RAB5C-208ENST00000551338 SFTPCP11686 197 aa9.46□□□□□ -0.9
RAB5C-208ENST00000551338 CCL3L1P16619 93 aa9.46□□□□□ -0.9
RAB5C-208ENST00000551338 NFYBP25208 207 aa9.46□□□□□ -0.9
RAB5C-208ENST00000551338 THBS3P49746 956 aa9.46□□□□□ -0.9
RAB5C-208ENST00000551338 FHITP49789 147 aa9.46□□□□□ -0.9
RAB5C-208ENST00000551338 GNG10P50151 68 aa9.46□□□□□ -0.9
RAB5C-208ENST00000551338 RAB5CP51148 216 aa9.46□□□□□ -0.9
RAB5C-208ENST00000551338 MRPS11P82912 194 aaKnown RBP9.46□□□□□ -0.9
RAB5C-208ENST00000551338 RUNX1Q01196 453 aa9.46□□□□□ -0.9
RAB5C-208ENST00000551338 TFF3Q07654 80 aa9.46□□□□□ -0.9
RAB5C-208ENST00000551338 ZNF672Q499Z4 452 aaPredicted RBP9.46□□□□□ -0.9
RAB5C-208ENST00000551338 SLC25A48Q6ZT89 311 aaKnown RBP9.46□□□□□ -0.9
RAB5C-208ENST00000551338 OR10A7Q8NGE5 316 aa9.46□□□□□ -0.9
RAB5C-208ENST00000551338 LRRC46Q96FV0 321 aa9.46□□□□□ -0.9
RAB5C-208ENST00000551338 TMEM204Q9BSN7 226 aa9.46□□□□□ -0.9
RAB5C-208ENST00000551338 KAAG1Q9UBP8 84 aa9.46□□□□□ -0.9
RAB5C-208ENST00000551338 FAM96BQ9Y3D0 163 aa9.46□□□□□ -0.9
RAB5C-208ENST00000551338 IGHV1-69-2A0A0G2JMI3 117 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 FAM90A9PA6NNJ1 464 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 PMS2P5A8MQ11 134 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 TRIM77I1YAP6 450 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 NDUFB3O43676 98 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 APOC3P02656 99 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 DAOP14920 347 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 RPL31P62899 125 aaKnown RBP9.45□□□□□ -0.9
RAB5C-208ENST00000551338 ZNF616Q08AN1 781 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 AARDQ4LEZ3 155 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 SPANXN5Q5MJ07 72 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 C10orf91Q5T1B1 145 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 ATRAIDQ6UW56 229 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 LYG1Q8N1E2 194 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 ZNF383Q8NA42 475 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 FAM213BQ8TBF2 198 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 CA5BP1Q8WTZ4 195 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 ZDHHC16Q969W1 377 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 GNPNAT1Q96EK6 184 aaPredicted RBP9.45□□□□□ -0.9
RAB5C-208ENST00000551338 NARS2Q96I59 477 aaKnown RBP9.45□□□□□ -0.9
RAB5C-208ENST00000551338 ZNF714Q96N38 554 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 S1PR3Q99500 378 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 SCRT1Q9BWW7 348 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 QTRT1Q9BXR0 403 aaKnown RBP9.45□□□□□ -0.9
RAB5C-208ENST00000551338 GAL3ST2Q9H3Q3 398 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 TREM1Q9NP99 234 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 PRELID3BQ9Y3B1 194 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms