RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 C12orf29Q8N999 325 aa3.36□□□□□ -1.87
HCFC2-204ENST00000550335 OR8A1Q8NGG7 326 aa3.36□□□□□ -1.87
HCFC2-204ENST00000550335 SMIM12Q96EX1 92 aa3.36□□□□□ -1.87
HCFC2-204ENST00000550335 ZNF2Q9BSG1 426 aaPredicted RBP3.36□□□□□ -1.87
HCFC2-204ENST00000550335 NSRP1Q9H0G5 558 aaKnown RBP3.36□□□□□ -1.87
HCFC2-204ENST00000550335 FAM60AQ9NP50 221 aa3.36□□□□□ -1.87
HCFC2-204ENST00000550335 STOML2Q9UJZ1 356 aa3.36□□□□□ -1.87
HCFC2-204ENST00000550335 TCHHQ07283 1943 aa3.36□□□□□ -1.87
HCFC2-204ENST00000550335 PLXNB3Q9ULL4 1909 aa3.36□□□□□ -1.87
HCFC2-204ENST00000550335 COL4A2P08572 1712 aa3.36□□□□□ -1.87
HCFC2-204ENST00000550335 KMT2EQ8IZD2 1858 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 NUP210Q8TEM1 1887 aaPredicted RBP3.35□□□□□ -1.87
HCFC2-204ENST00000550335 BDP1A6H8Y1 2624 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 A8MUU9 505 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 ZW10O43264 779 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 SYNGR1O43759 233 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 TRGV3P03979 118 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 PMELP40967 661 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 CDC34P49427 236 aaPredicted RBP3.35□□□□□ -1.87
HCFC2-204ENST00000550335 SKP2Q13309 424 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 LAIR2Q6ISS4 152 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 RNF182Q8N6D2 247 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 ZIC4Q8N9L1 334 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 ZFP62Q8NB50 900 aaPredicted RBP3.35□□□□□ -1.87
HCFC2-204ENST00000550335 OR5D18Q8NGL1 313 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 OR5L1Q8NGL2 311 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 OR11L1Q8NGX0 322 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 PRSS27Q9BQR3 290 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 SCRT1Q9BWW7 348 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 RSPO3Q9BXY4 272 aaPredicted RBP3.35□□□□□ -1.87
HCFC2-204ENST00000550335 UGT2B28Q9BY64 529 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 GABARAPL1Q9H0R8 117 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 FAM206AQ9NX38 181 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 CCL26Q9Y258 94 aa3.35□□□□□ -1.87
HCFC2-204ENST00000550335 GMNCA6NCL1 334 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 OR6C70A6NIJ9 312 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 METTL15A6NJ78 407 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 C16orf90A8MZG2 172 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 IGLL5B9A064 214 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 K7EQS6 105 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 CCRL2O00421 344 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 TCF21O43680 179 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 HPGDSO60760 199 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 NIPSNAP2O75323 286 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 SOX14O95416 240 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 IGLV3-27P01718 113 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 APODP05090 189 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 GABRA1P14867 456 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 UGT2B7P16662 529 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 BLVRAP53004 296 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 FAM3AP98173 230 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 CDKL4Q5MAI5 379 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 TMEM251Q8N6I4 163 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 ZNRF2Q8NHG8 242 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 MAL2Q969L2 176 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 SHANK2-AS3Q9BTD1 123 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 CHST5Q9GZS9 411 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 PLEKHJ1Q9NW61 149 aa3.34□□□□□ -1.87
HCFC2-204ENST00000550335 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.34□□□□□ -1.87
HCFC2-204ENST00000550335 PTPRDP23468 1912 aa3.34□□□□□ -1.88
HCFC2-204ENST00000550335 GREB1Q4ZG55 1949 aa3.34□□□□□ -1.88
HCFC2-204ENST00000550335 DENND4CQ5VZ89 1909 aa3.34□□□□□ -1.88
HCFC2-204ENST00000550335 DOCK6Q96HP0 2047 aa3.34□□□□□ -1.88
HCFC2-204ENST00000550335 CXorf51AA0A1B0GTR3 108 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 LEUTXA8MZ59 168 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 F5H5P2 479 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 EPPINO95925 133 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 UCHL3P15374 230 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 PRPS1L1P21108 318 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 COILP38432 576 aaPredicted RBP3.33□□□□□ -1.88
HCFC2-204ENST00000550335 MYL5Q02045 173 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 C1DQ13901 141 aaKnown RBP3.33□□□□□ -1.88
HCFC2-204ENST00000550335 PAFAH1B3Q15102 231 aaKnown RBP3.33□□□□□ -1.88
HCFC2-204ENST00000550335 LY6EQ16553 131 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 HLA-DRB5Q30154 266 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 KHDRBS2Q5VWX1 349 aaKnown RBP3.33□□□□□ -1.88
HCFC2-204ENST00000550335 TMEM215Q68D42 235 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 PPP1R2P3Q6NXS1 205 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 DRAM2Q6UX65 266 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 H1FOOQ8IZA3 346 aaPredicted RBP3.33□□□□□ -1.88
HCFC2-204ENST00000550335 RIBC1Q8N443 379 aaPredicted RBP3.33□□□□□ -1.88
HCFC2-204ENST00000550335 KLF14Q8TD94 323 aaPredicted RBP3.33□□□□□ -1.88
HCFC2-204ENST00000550335 CMTM5Q96DZ9 223 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 REEP6Q96HR9 211 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 TSSK6Q9BXA6 273 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 TXNIPQ9H3M7 391 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 KCNIP2Q9NS61 270 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 DHCR7Q9UBM7 475 aaKnown RBP3.33□□□□□ -1.88
HCFC2-204ENST00000550335 DNAJC12Q9UKB3 198 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 ICOSQ9Y6W8 199 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 OBSL1O75147 1896 aa3.33□□□□□ -1.88
HCFC2-204ENST00000550335 ANAPC1Q9H1A4 1944 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 ZDBF2Q9HCK1 2354 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 C5orf42Q9H799 3197 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 IGHV1-45A0A0A0MS14 117 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 B4DEV8 164 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 M0QYV0 167 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 SLC31A1O15431 190 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 IGLV3-19P01714 112 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 HLA-AP01891 365 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms