RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 Q6ZT83 130 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 OR1K1Q8NGR3 316 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 C2orf50Q96LR7 162 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 VKORC1Q9BQB6 163 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 MED13Q9UHV7 2174 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 MUC22E2RYF6 1773 aaPredicted RBP7.4□□□□□ -1.22
CLIP1-218ENST00000545889 A0A1W2PPQ1 181 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 BCL3P20749 454 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 GUCA2AQ02747 115 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 TBR1Q16650 682 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 C12orf73Q69YU5 71 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 ABLIM2Q6H8Q1 611 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 C1orf162Q8NEQ5 155 aaPredicted RBP7.4□□□□□ -1.22
CLIP1-218ENST00000545889 OR10AC1Q8NH08 325 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 OR1L1Q8NH94 360 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 SLC45A2Q9UMX9 530 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 A0A0G2JMM0 328 aa7.4□□□□□ -1.23
CLIP1-218ENST00000545889 A0A1W2PPB8 328 aa7.4□□□□□ -1.23
CLIP1-218ENST00000545889 A0A1W2PRS3 328 aa7.4□□□□□ -1.23
CLIP1-218ENST00000545889 KIR3DP1A8MWS1 328 aa7.4□□□□□ -1.23
CLIP1-218ENST00000545889 SYNGR1O43759 233 aa7.4□□□□□ -1.23
CLIP1-218ENST00000545889 THY1P04216 161 aa7.4□□□□□ -1.23
CLIP1-218ENST00000545889 GALR1P47211 349 aa7.4□□□□□ -1.23
CLIP1-218ENST00000545889 IQCJQ1A5X6 159 aa7.4□□□□□ -1.23
CLIP1-218ENST00000545889 RPEL1Q2QD12 228 aa7.4□□□□□ -1.23
CLIP1-218ENST00000545889 ACSF3Q4G176 576 aaPredicted RBP7.4□□□□□ -1.23
CLIP1-218ENST00000545889 MIDNQ504T8 468 aa7.4□□□□□ -1.23
CLIP1-218ENST00000545889 TMEM128Q5BJH2 165 aa7.4□□□□□ -1.23
CLIP1-218ENST00000545889 ZNF826PQ6ZT77 177 aa7.4□□□□□ -1.23
CLIP1-218ENST00000545889 KLHDC3Q9BQ90 382 aa7.4□□□□□ -1.23
CLIP1-218ENST00000545889 CLDN16Q9Y5I7 305 aa7.4□□□□□ -1.23
CLIP1-218ENST00000545889 ATG2AQ2TAZ0 1938 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 CIDEAO60543 219 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 OR2A4O95047 310 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 RFPL3SP0C7P2 107 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 IZUMO4Q1ZYL8 232 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 ZNF787Q6DD87 383 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 BTNL8Q6UX41 500 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 OR2A7Q96R45 310 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 RALYQ9UKM9 306 aaKnown RBP7.39□□□□□ -1.23
CLIP1-218ENST00000545889 TMED3Q9Y3Q3 217 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 TRDCB7Z8K6 153 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 TAAR5O14804 337 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 RAB29O14966 203 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 AGAP20933 346 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 GLRXP35754 106 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 NHLH1Q02575 133 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 HAGHQ16775 308 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 SLC25A53Q5H9E4 307 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 RIPPLY2Q5TAB7 128 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 C3orf56Q8N813 242 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 NECAP1Q8NC96 275 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 OR8G5Q8NG78 346 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 OR4B1Q8NGF8 309 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 FAM222BQ8WU58 562 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 SLC2A9Q9NRM0 540 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 MPDZO75970 2070 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 HEATR5AQ86XA9 2040 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 ELOA3CA0A087WX78 387 aaPredicted RBP7.39□□□□□ -1.23
CLIP1-218ENST00000545889 TRAV1-2A0A0B4J238 106 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 BGLAPP02818 100 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 KIR2DL2P43627 348 aaPredicted RBP7.39□□□□□ -1.23
CLIP1-218ENST00000545889 VWA1Q6PCB0 445 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 C8orf46Q8TAG6 207 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 SNRNP40Q96DI7 357 aaKnown RBP7.39□□□□□ -1.23
CLIP1-218ENST00000545889 WBP1Q96G27 269 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 ZNF488Q96MN9 340 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 RAB40CQ96S21 281 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 SOSTQ9BQB4 213 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 RNF122Q9H9V4 155 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 IGHV3-21A0A0B4J1V1 117 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 hCG_38984A0A1B0GV85 526 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 M0QZK8 103 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 GGCTO75223 188 aaKnown RBP7.39□□□□□ -1.23
CLIP1-218ENST00000545889 CD37P11049 281 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 CD40P25942 277 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 TM4SF20Q53R12 229 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 TOMM20LQ6UXN7 152 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 SSC4DQ8WTU2 575 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 RAX2Q96IS3 184 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 MS4A10Q96PG2 267 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 TP53RKQ96S44 253 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 CNTD2Q9H8S5 307 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 HSF4Q9ULV5 492 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 ARFGEF3Q5TH69 2177 aa7.39□□□□□ -1.23
CLIP1-218ENST00000545889 CEP192Q8TEP8 1941 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 MFNGO00587 321 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 PPP1CCP36873 323 aaKnown RBP7.38□□□□□ -1.23
CLIP1-218ENST00000545889 NBL1P41271 181 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 SLC38A11Q08AI6 406 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 OR4A5Q8NH83 315 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 KLF14Q8TD94 323 aaPredicted RBP7.38□□□□□ -1.23
CLIP1-218ENST00000545889 TMEM18Q96B42 140 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 NPFFR1Q9GZQ6 430 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 UFC1Q9Y3C8 167 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 CHCHD2Q9Y6H1 151 aaPredicted RBP7.38□□□□□ -1.23
CLIP1-218ENST00000545889 HIVEP2P31629 2446 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 A0A1W2PNV4 684 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 A0A1W2PRX2 142 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 IGHA1P01876 353 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms