RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 PHF21AQ96BD5 680 aa6.03□□□□□ -1.44
SNHG1-223ENST00000545440 ARHGAP5-AS1Q96IT6 56 aa6.03□□□□□ -1.44
SNHG1-223ENST00000545440 RASL11BQ9BPW5 248 aa6.03□□□□□ -1.44
SNHG1-223ENST00000545440 NABP2Q9BQ15 211 aa6.03□□□□□ -1.44
SNHG1-223ENST00000545440 HDHD3Q9BSH5 251 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-223ENST00000545440 PECRQ9BY49 303 aa6.03□□□□□ -1.44
SNHG1-223ENST00000545440 Q9N2K0 584 aa6.03□□□□□ -1.44
SNHG1-223ENST00000545440 ZFP57Q9NU63 452 aa6.03□□□□□ -1.44
SNHG1-223ENST00000545440 RAB22AQ9UL26 194 aa6.03□□□□□ -1.44
SNHG1-223ENST00000545440 MFNGO00587 321 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 NBR2O15453 112 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 HSPA12AO43301 675 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 SPDEFO95238 335 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 DIRAS3O95661 229 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 HLA-DRB1P01911 266 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 IGF1P05019 195 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 OR5H8P0DN80 308 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 RAB3BP20337 219 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 VDAC1P21796 283 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 GADD45AP24522 165 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 FGF9P31371 208 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-223ENST00000545440 OR3A3P47888 321 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 F2RL1P55085 397 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 TMEM50BP56557 158 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 OR10A3P58181 314 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 ACTBP60709 375 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 CFHR3Q02985 330 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 KIR2DS1Q14954 304 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 C2orf76Q3KRA6 126 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 C5orf24Q7Z6I8 188 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 PTX4Q96A99 478 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 RAB3CQ96E17 227 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 CMSS1Q9BQ75 279 aaKnown RBP6.02□□□□□ -1.45
SNHG1-223ENST00000545440 HSPB9Q9BQS6 159 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 ZNF251Q9BRH9 671 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 CHCHD6Q9BRQ6 235 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 AGMATQ9BSE5 352 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 YTHDF1Q9BYJ9 559 aaKnown RBP6.02□□□□□ -1.45
SNHG1-223ENST00000545440 SLC25A32Q9H2D1 315 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 NECAP2Q9NVZ3 263 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 ZNF107Q9UII5 783 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-223ENST00000545440 SORL1Q92673 2214 aa6.02□□□□□ -1.45
SNHG1-223ENST00000545440 METTL21EPA6NDL7 271 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 LINC01548A6NM66 108 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 RBBP9O75884 186 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 NDUFA3O95167 84 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 IGHG4P01861 327 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 FCGR3AP08637 254 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 SCTP09683 121 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 CD3GP09693 182 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 SLC2A2P11168 524 aaPredicted RBP6.01□□□□□ -1.45
SNHG1-223ENST00000545440 HIST1H1DP16402 221 aaKnown RBP6.01□□□□□ -1.45
SNHG1-223ENST00000545440 PSMB9P28065 219 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 SERPINB10P48595 397 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 THBS3P49746 956 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 MRPS15P82914 257 aaKnown RBP6.01□□□□□ -1.45
SNHG1-223ENST00000545440 PNLIPRP3Q17RR3 467 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 MOGAT2Q3SYC2 334 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 CXorf66Q5JRM2 361 aaPredicted RBP6.01□□□□□ -1.45
SNHG1-223ENST00000545440 C22orf42Q6IC83 251 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 ZNF773Q6PK81 442 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 FAM131AQ6UXB0 335 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 NR2C2APQ86WQ0 139 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 ZNF695Q8IW36 515 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 KLHL30-AS1Q8NEE0 82 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 NPBQ8NG41 125 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 OR4A4PQ8NGN8 299 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 OR10R2Q8NGX6 335 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 AIFM2Q9BRQ8 373 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 CABLES2Q9BTV7 478 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 GPR61Q9BZJ8 451 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 TOLLIPQ9H0E2 274 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 PARP12Q9H0J9 701 aaKnown RBP6.01□□□□□ -1.45
SNHG1-223ENST00000545440 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.01□□□□□ -1.45
SNHG1-223ENST00000545440 OR1A1Q9P1Q5 309 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 KIAA1456Q9P272 454 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 LINC00527Q9UJ94 153 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 STUB1Q9UNE7 303 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 KCNK7Q9Y2U2 307 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 WASHC3Q9Y3C0 194 aa6.01□□□□□ -1.45
SNHG1-223ENST00000545440 IGKV1-6A0A0C4DH72 117 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 TRDCB7Z8K6 153 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 H0YJW9 148 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 ATP6V0E1O15342 81 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 FABP7O15540 132 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 CT45A6P0DMU7 189 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 CT45A5P0DMU8 189 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 CT45A7P0DMV0 189 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 IGLL1P15814 213 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 PSMB8P28062 276 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 MC5RP33032 325 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 CEACAM6P40199 344 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 MYCNOSP40205 109 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 SUMO2P61956 95 aaKnown RBP6□□□□□ -1.45
SNHG1-223ENST00000545440 PLA2G7Q13093 441 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 ARL6IP1Q15041 203 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 SRSF7Q16629 238 aaKnown RBP eCLIP6□□□□□ -1.45
SNHG1-223ENST00000545440 C5orf64Q2M2E5 130 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 KCTD21Q4G0X4 260 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 RPL39P5Q59GN2 51 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms