RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 IRF3Q14653 427 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 CDK5R1Q15078 307 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 TWIST1Q15672 202 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 ODF3L2Q3SX64 289 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 C6orf141Q5SZD1 244 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 C6orf183Q5T699 404 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 C1orf134Q5TEV5 83 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 ELP2Q6IA86 826 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 GLYATQ6IB77 296 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 TRAT1Q6PIZ9 186 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 ZNF322Q6U7Q0 402 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-220ENST00000544550 GLDNQ6ZMI3 551 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-220ENST00000544550 RBPMS2Q6ZRY4 209 aaKnown RBP2.99□□□□□ -1.93
SNHG1-220ENST00000544550 STX19Q8N4C7 294 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 TCEANCQ8N8B7 351 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 AQP11Q8NBQ7 271 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 ZNF439Q8NDP4 499 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 OR1L6Q8NGR2 347 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 OR13C5Q8NGS8 318 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 DYDC1Q8WWB3 177 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 GALNT14Q96FL9 552 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 URB1-AS1Q96HZ7 61 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 PYURFQ96I23 114 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 C18orf15Q96N68 181 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 SULT4A1Q9BR01 284 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 RNF126Q9BV68 326 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 DGCR6LQ9BY27 220 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 FBXL15Q9H469 300 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 GORASP2Q9H8Y8 452 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 TAS2R1Q9NYW7 299 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 KIAA2026Q5HYC2 2103 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 HSPG2P98160 4391 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 IGHV3-43A0A0B4J1X8 118 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 IGKV1-9A0A0C4DH69 117 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 FAM223BA6NKX1 122 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 MPTX1A8MV57 137 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 ZNF670-ZNF695F2Z2N8 137 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 BMPR1BO00238 502 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 FCN1O00602 326 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 NME4O00746 187 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 ARPC2O15144 300 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 SLC31A2O15432 143 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 NDUFB4O95168 129 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 CA2P00918 260 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 IFNA21P01568 189 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 IFNA17P01571 189 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 TRBV12-3P01733 135 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 MT-ND2P03891 347 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 KRT8P05787 483 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 MRPL3P09001 348 aaKnown RBP2.98□□□□□ -1.93
SNHG1-220ENST00000544550 T-ENOLP0DO92 83 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 IGHV3-43DP0DP04 118 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 ZNF182P17025 639 aaPredicted RBP2.98□□□□□ -1.93
SNHG1-220ENST00000544550 CBLN1P23435 193 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 HCCSP53701 268 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 CXCR4P61073 352 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 GK3PQ14409 553 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 FXYD3Q14802 87 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 ODF4Q2M2E3 257 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 CT45A1Q5HYN5 189 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 TMEM244Q5VVB8 128 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 GLT8D1Q68CQ7 371 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 OR4A47Q6IF82 309 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 Q6ZR54 194 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 ZNF833PQ6ZTB9 187 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 ZNF367Q7RTV3 350 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 LINC00596Q86U02 117 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 UBE2DNLQ8IWF7 75 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 FAM223AQ8IWN6 122 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 TMEM61Q8N0U2 210 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 SUMF2Q8NBJ7 301 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 ADAD2Q8NCV1 583 aaKnown RBP2.98□□□□□ -1.93
SNHG1-220ENST00000544550 OR5T1Q8NG75 326 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 OR5D18Q8NGL1 313 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 CT45A3Q8NHU0 189 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 GRPEL2Q8TAA5 225 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 PLPPR1Q8TBJ4 325 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 MARC2Q969Z3 335 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 RFT1Q96AA3 541 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 MRPS24Q96EL2 167 aaKnown RBP2.98□□□□□ -1.93
SNHG1-220ENST00000544550 CLCC1Q96S66 551 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 CNN2Q99439 309 aaKnown RBP2.98□□□□□ -1.93
SNHG1-220ENST00000544550 TSNAXQ99598 290 aaKnown RBP2.98□□□□□ -1.93
SNHG1-220ENST00000544550 NDUFAF3Q9BU61 184 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 MRPL20Q9BYC9 149 aaKnown RBP2.98□□□□□ -1.93
SNHG1-220ENST00000544550 CSTL1Q9H114 145 aa2.98□□□□□ -1.93
SNHG1-220ENST00000544550 RCC2Q9P258 522 aaKnown RBP2.98□□□□□ -1.93
SNHG1-220ENST00000544550 METTL1Q9UBP6 276 aaKnown RBP2.98□□□□□ -1.93
SNHG1-220ENST00000544550 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.97□□□□□ -1.93
SNHG1-220ENST00000544550 TRAV39A0A0B4J263 110 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 LOC107986453A0A1B0GWG9 222 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 PRR32B1ATL7 298 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 H7C2Y5 167 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 AIPO00170 330 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 SULT1B1O43704 296 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 GGCTO75223 188 aaKnown RBP2.97□□□□□ -1.93
SNHG1-220ENST00000544550 OR7C1O76099 320 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-220ENST00000544550 RPP14O95059 124 aaKnown RBP2.97□□□□□ -1.93
SNHG1-220ENST00000544550 FADS2O95864 444 aaKnown RBP2.97□□□□□ -1.93
SNHG1-220ENST00000544550 RPSAP08865 295 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms