RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 UBA52P62987 128 aaKnown RBP11.25□□□□□ -0.61
HCFC2-202ENST00000544223 TMEM204Q9BSN7 226 aa11.25□□□□□ -0.61
HCFC2-202ENST00000544223 GFOD1Q9NXC2 390 aa11.25□□□□□ -0.61
HCFC2-202ENST00000544223 CR1LQ2VPA4 569 aa11.24□□□□□ -0.61
HCFC2-202ENST00000544223 ZDHHC16Q969W1 377 aa11.24□□□□□ -0.61
HCFC2-202ENST00000544223 LRRC46Q96FV0 321 aa11.24□□□□□ -0.61
HCFC2-202ENST00000544223 JPT1Q9UK76 154 aa11.24□□□□□ -0.61
HCFC2-202ENST00000544223 TRAV3A0A0B4J244 114 aa11.24□□□□□ -0.61
HCFC2-202ENST00000544223 TNFRSF13BO14836 293 aaPredicted RBP11.24□□□□□ -0.61
HCFC2-202ENST00000544223 NDUFB3O43676 98 aa11.24□□□□□ -0.61
HCFC2-202ENST00000544223 YPEL1O60688 119 aa11.24□□□□□ -0.61
HCFC2-202ENST00000544223 PAX6P26367 422 aa11.24□□□□□ -0.61
HCFC2-202ENST00000544223 EWSR1Q01844 656 aaKnown RBP eCLIP11.24□□□□□ -0.61
HCFC2-202ENST00000544223 ID3Q02535 119 aa11.24□□□□□ -0.61
HCFC2-202ENST00000544223 SSX8Q7RTT4 187 aa11.24□□□□□ -0.61
HCFC2-202ENST00000544223 BAP18Q8IXM2 172 aa11.24□□□□□ -0.61
HCFC2-202ENST00000544223 HSD17B11Q8NBQ5 300 aa11.24□□□□□ -0.61
HCFC2-202ENST00000544223 YPEL2Q96QA6 119 aa11.24□□□□□ -0.61
HCFC2-202ENST00000544223 C11orf1Q9H5F2 150 aa11.24□□□□□ -0.61
HCFC2-202ENST00000544223 TXNL1O43396 289 aa11.23□□□□□ -0.61
HCFC2-202ENST00000544223 PITX3O75364 302 aa11.23□□□□□ -0.61
HCFC2-202ENST00000544223 RBMXL2O75526 392 aaKnown RBP11.23□□□□□ -0.61
HCFC2-202ENST00000544223 C1QL1O75973 258 aa11.23□□□□□ -0.61
HCFC2-202ENST00000544223 MYOD1P15172 320 aa11.23□□□□□ -0.61
HCFC2-202ENST00000544223 OR2C3Q8N628 320 aa11.23□□□□□ -0.61
HCFC2-202ENST00000544223 IDI2-AS1Q9NZ38 188 aa11.23□□□□□ -0.61
HCFC2-202ENST00000544223 FHITP49789 147 aa11.23□□□□□ -0.61
HCFC2-202ENST00000544223 AKR1C1Q04828 323 aa11.23□□□□□ -0.61
HCFC2-202ENST00000544223 LINC00862A6NCI5 91 aa11.22□□□□□ -0.61
HCFC2-202ENST00000544223 TRAT1Q6PIZ9 186 aa11.22□□□□□ -0.61
HCFC2-202ENST00000544223 EDARADDQ8WWZ3 215 aa11.22□□□□□ -0.61
HCFC2-202ENST00000544223 TOLLIPQ9H0E2 274 aa11.22□□□□□ -0.61
HCFC2-202ENST00000544223 A0A1B0GV50 99 aa11.22□□□□□ -0.61
HCFC2-202ENST00000544223 hADV38S2A0JD32 116 aa11.22□□□□□ -0.61
HCFC2-202ENST00000544223 MARCH11A6NNE9 402 aa11.22□□□□□ -0.61
HCFC2-202ENST00000544223 PPIHO43447 177 aaKnown RBP11.22□□□□□ -0.61
HCFC2-202ENST00000544223 IGKV1-16P04430 117 aa11.22□□□□□ -0.61
HCFC2-202ENST00000544223 OR9G9P0C7N8 305 aa11.22□□□□□ -0.61
HCFC2-202ENST00000544223 METTL15P1P0C7V9 234 aa11.22□□□□□ -0.61
HCFC2-202ENST00000544223 TPT1P13693 172 aaKnown RBP11.22□□□□□ -0.61
HCFC2-202ENST00000544223 VAMP2P63027 116 aa11.22□□□□□ -0.61
HCFC2-202ENST00000544223 LRRC10Q5BKY1 277 aa11.22□□□□□ -0.61
HCFC2-202ENST00000544223 TMEM252Q8N6L7 170 aa11.22□□□□□ -0.61
HCFC2-202ENST00000544223 ZNF714Q96N38 554 aa11.22□□□□□ -0.61
HCFC2-202ENST00000544223 ZNF251Q9BRH9 671 aa11.22□□□□□ -0.61
HCFC2-202ENST00000544223 ZNF469Q96JG9 3925 aaPredicted RBP11.21□□□□□ -0.61
HCFC2-202ENST00000544223 CLEC18AA5D8T8 446 aa11.21□□□□□ -0.61
HCFC2-202ENST00000544223 TMEM8BA6NDV4 472 aa11.21□□□□□ -0.61
HCFC2-202ENST00000544223 I3L521 148 aa11.21□□□□□ -0.61
HCFC2-202ENST00000544223 CRYZL1O95825 349 aa11.21□□□□□ -0.61
HCFC2-202ENST00000544223 DANCRP0C864 163 aa11.21□□□□□ -0.61
HCFC2-202ENST00000544223 DYNLT3P51808 116 aa11.21□□□□□ -0.61
HCFC2-202ENST00000544223 PDZD9Q8IXQ8 264 aa11.21□□□□□ -0.61
HCFC2-202ENST00000544223 ZNF383Q8NA42 475 aa11.21□□□□□ -0.61
HCFC2-202ENST00000544223 CLEC18CQ8NCF0 446 aa11.21□□□□□ -0.61
HCFC2-202ENST00000544223 ZNF439Q8NDP4 499 aa11.21□□□□□ -0.61
HCFC2-202ENST00000544223 OR5C1Q8NGR4 320 aa11.21□□□□□ -0.61
HCFC2-202ENST00000544223 SPIN2AQ99865 258 aa11.21□□□□□ -0.61
HCFC2-202ENST00000544223 SPIN2BQ9BPZ2 258 aa11.21□□□□□ -0.61
HCFC2-202ENST00000544223 RPUSD1Q9UJJ7 312 aaKnown RBP11.21□□□□□ -0.61
HCFC2-202ENST00000544223 LINC00312Q9Y6C7 94 aa11.21□□□□□ -0.61
HCFC2-202ENST00000544223 GPR137BO60478 399 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 OPN1MWP04001 364 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 OPN1MW2P0DN77 364 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 OPN1MW3P0DN78 364 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 RRASP10301 218 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 P2RY1P47900 373 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 MRPS11P82912 194 aaKnown RBP11.2□□□□□ -0.62
HCFC2-202ENST00000544223 RUNX1Q01196 453 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 ARL16Q0P5N6 197 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 CATR1Q13166 79 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 C11orf71Q6IPW1 123 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 OR1S2Q8NGQ3 325 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 IL22RA2Q969J5 263 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 REG4Q9BYZ8 158 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 USP9YO00507 2555 aaPredicted RBP11.2□□□□□ -0.62
HCFC2-202ENST00000544223 A0A1B0GU03 582 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 ZNF729A6NN14 1252 aaPredicted RBP11.2□□□□□ -0.62
HCFC2-202ENST00000544223 RNF212BA8MTL3 300 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 DAOP14920 347 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 SPANXN5Q5MJ07 72 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 R3HDM4Q96D70 268 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 QTRT1Q9BXR0 403 aaKnown RBP11.2□□□□□ -0.62
HCFC2-202ENST00000544223 CBLN4Q9NTU7 201 aa11.2□□□□□ -0.62
HCFC2-202ENST00000544223 LYRM2Q9NU23 88 aaPredicted RBP11.2□□□□□ -0.62
HCFC2-202ENST00000544223 EIF3GO75821 320 aaKnown RBP eCLIP11.19□□□□□ -0.62
HCFC2-202ENST00000544223 ARHGDIBP52566 201 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 TOR2AQ5JU69 321 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 ZNF841Q6ZN19 808 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 HSD17B10Q99714 261 aaKnown RBP11.19□□□□□ -0.62
HCFC2-202ENST00000544223 SLC25A32Q9H2D1 315 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 RBKSQ9H477 322 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 PLEKHA2Q9HB19 425 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 SEBOXQ9HB31 216 aaPredicted RBP11.19□□□□□ -0.62
HCFC2-202ENST00000544223 BARX1Q9HBU1 254 aaPredicted RBP11.19□□□□□ -0.62
HCFC2-202ENST00000544223 AGPAT2O15120 278 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 SYNGR2O43760 224 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 SCO1O75880 301 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 FAM157CP0CG43 387 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 AANATQ16613 207 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms