RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 NIPSNAP1Q9BPW8 284 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 HOPXQ9BPY8 73 aaPredicted RBP3.49□□□□□ -1.85
LIMS1-214ENST00000542845 CHRDL1Q9BU40 450 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 NCOR1P1Q9H4R4 102 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 MAP6D1Q9H9H5 199 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 OR2S2Q9NQN1 319 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 ZC4H2Q9NQZ6 224 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 MLXQ9UH92 298 aa3.49□□□□□ -1.85
LIMS1-214ENST00000542845 DMBT1Q9UGM3 2413 aaPredicted RBP3.48□□□□□ -1.85
LIMS1-214ENST00000542845 TRAV10A0A0B4J240 114 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 KIR2DL5BA0A0G2JN68 375 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 KIR2DL5BA0A0G2JPC4 375 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 LINC00473A8K010 186 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 H0YIZ8 118 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 H3BUA1 57 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 SLC22A1O15245 554 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 MPPED1O15442 326 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 RBMXL2O75526 392 aaKnown RBP3.48□□□□□ -1.85
LIMS1-214ENST00000542845 OR7C1O76099 320 aaPredicted RBP3.48□□□□□ -1.85
LIMS1-214ENST00000542845 FADS2O95864 444 aaKnown RBP3.48□□□□□ -1.85
LIMS1-214ENST00000542845 IGHV3-23P01764 117 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 MT-ND4P03905 459 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 SEMG1P04279 462 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 HMGN1P05114 100 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 SCTP09683 121 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 DBTP11182 482 aaKnown RBP3.48□□□□□ -1.85
LIMS1-214ENST00000542845 COX4I1P13073 169 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 SLC2A5P22732 501 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 PPP1CCP36873 323 aaKnown RBP3.48□□□□□ -1.85
LIMS1-214ENST00000542845 ZNF137PP52743 207 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 PSME3P61289 254 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 PJVKQ0ZLH3 352 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 MED21Q13503 144 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 PSG5Q15238 335 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 MORN2Q502X0 79 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 ZNF585BQ52M93 769 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 RPL39P5Q59GN2 51 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 Q6ZSR3 168 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 BCDIN3DQ7Z5W3 292 aaKnown RBP3.48□□□□□ -1.85
LIMS1-214ENST00000542845 SPATA12Q7Z6I5 190 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 APRG1Q8IVJ8 170 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 ODF3L1Q8IXM7 274 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 SAXO1Q8IYX7 474 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 KIR2DL5AQ8N109 375 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 PRSS35Q8N3Z0 413 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 STX19Q8N4C7 294 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 OR13C3Q8NGS6 347 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 KIR2DL5BQ8NHK3 375 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 RFKQ969G6 155 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 SPSB1Q96BD6 273 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 DAZAP1Q96EP5 407 aaKnown RBP3.48□□□□□ -1.85
LIMS1-214ENST00000542845 GALNT14Q96FL9 552 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 CNN2Q99439 309 aaKnown RBP3.48□□□□□ -1.85
LIMS1-214ENST00000542845 FEVQ99581 238 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 FAM192AQ9GZU8 254 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 CSTL1Q9H114 145 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 EFCAB1Q9HAE3 211 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 RHOFQ9HBH0 211 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 SAR1AQ9NR31 198 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 TVP23BQ9NYZ1 205 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 ENOPH1Q9UHY7 261 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 ST3GAL6Q9Y274 331 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 S4R3C0 116 aa3.48□□□□□ -1.85
LIMS1-214ENST00000542845 DEFB131BA0A096LNP1 70 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 SAA2-SAA4A0A096LPE2 208 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 CCDC182A6NF36 153 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 METTL15A6NJ78 407 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 MPTX1A8MV57 137 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 H3BNX3 289 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 CTDSP2O14595 271 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 PRYO14603 147 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 GEMIN2O14893 280 aaKnown RBP3.47□□□□□ -1.85
LIMS1-214ENST00000542845 GGCTO75223 188 aaKnown RBP3.47□□□□□ -1.85
LIMS1-214ENST00000542845 S1PR2O95136 353 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 SAA2P0DJI9 122 aaPredicted RBP3.47□□□□□ -1.85
LIMS1-214ENST00000542845 CT45A6P0DMU7 189 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 CT45A5P0DMU8 189 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 CT45A7P0DMV0 189 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 RCC1P18754 421 aaPredicted RBP3.47□□□□□ -1.85
LIMS1-214ENST00000542845 KCNJ3P48549 501 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 HMGA2P52926 109 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 RHOGP84095 191 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 KISS1Q15726 138 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 Q3ZCU0 254 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 FAM106AQ4KMX7 169 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 RNASE12Q5GAN4 147 aaKnown RBP3.47□□□□□ -1.85
LIMS1-214ENST00000542845 SLC25A30Q5SVS4 291 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 SERTAD4-AS1Q5TG53 156 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 ZNF691Q5VV52 312 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 Q6ZR54 194 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 UTS2BQ765I0 119 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 SSX6Q7RTT6 188 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 SERPINA12Q8IW75 414 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 DRAXINQ8NBI3 349 aaPredicted RBP3.47□□□□□ -1.85
LIMS1-214ENST00000542845 CCDC54Q8NEL0 328 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 OR10G2Q8NGC3 310 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 KCNG3Q8TAE7 436 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 CD300LFQ8TDQ1 290 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 TNFAIP8L1Q8WVP5 186 aa3.47□□□□□ -1.85
LIMS1-214ENST00000542845 GHSRQ92847 366 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms