RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 MST1LQ2TV78 715 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 CDCP2Q5VXM1 449 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 ZNF385CQ66K41 422 aaPredicted RBP6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 TEPPQ6URK8 271 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 WBP1Q96G27 269 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 C1orf147Q96MC9 270 aaPredicted RBP6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 SRD5A3Q9H8P0 318 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 TMEM167BQ9NRX6 74 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 DOCK10Q96BY6 2186 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 PKDREJQ9NTG1 2253 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 IGKV1-27A0A075B6S5 117 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 A0A0G2JMM0 328 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 A0A1W2PPB8 328 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 A0A1W2PRS3 328 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 KIR3DP1A8MWS1 328 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 RHBDL1O75783 438 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 PRDX2P32119 198 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 KLF3P57682 345 aaPredicted RBP6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 HIST3H3Q16695 136 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 STUMQ69YW2 141 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 TPPP3Q9BW30 176 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 PCNX1Q96RV3 2341 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 HELTA6NFD8 242 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 ZNF716A6NP11 495 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 C9JQL5 133 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 HPRT1P00492 218 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 OTX1P32242 354 aaPredicted RBP6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 CEBPDP49716 269 aaPredicted RBP6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 GAMTQ14353 236 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 RPEL1Q2QD12 228 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 LRRC75BQ2VPJ9 315 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 HES3Q5TGS1 186 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 TMEM45BQ96B21 275 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 RHOVQ96L33 236 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 TXNDC17Q9BRA2 123 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 TECRQ9NZ01 308 aaKnown RBP6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 SEMA5BQ9P283 1151 aa6.99□□□□□ -1.29
PRKAB1-207ENST00000542698 ZNF729A6NN14 1252 aaPredicted RBP6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 H0Y8G0 127 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 TCAPO15273 167 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 CNIH1O95406 144 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 CLDN14O95500 239 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 GCGP01275 180 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 TNFRSF1AP19438 455 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 AGAP20933 346 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 COL10A1Q03692 680 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 ICAM4Q14773 271 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 HEPN1Q6WQI6 88 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 OR5AU1Q8NGC0 362 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 FGFBP3Q8TAT2 258 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 TMEM204Q9BSN7 226 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 COA4Q9NYJ1 87 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 MARCH11A6NNE9 402 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 RAB29O14966 203 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 NDUFA2O43678 99 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 KLF7O75840 302 aaPredicted RBP6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 S1PR2O95136 353 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 SRP14P37108 136 aaKnown RBP6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 SPCS3P61009 180 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 WDR73Q6P4I2 378 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 NOL4LQ96MY1 436 aaPredicted RBP6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 HES4Q9HCC6 221 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 ZNF835Q9Y2P0 537 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 PXMP4Q9Y6I8 212 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 SPTAN1Q13813 2472 aaKnown RBP6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 TRAV38-1A0A0B4J264 116 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 LRRC3CA6NJW4 275 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 SNURFLB1AK76 121 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 K7EQM0 130 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 PRRG2O14669 202 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 CHEK1O14757 476 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 CELA3AP09093 270 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 OR10J1P30954 320 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 OPRK1P41145 380 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 IER3P46695 156 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 TCL1AP56279 114 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 FAM162BQ5T6X4 162 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 CYP2G1PQ6ZSU1 146 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 FAM214BQ7L5A3 538 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 WFDC8Q8IUA0 241 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 SDF2L1Q9HCN8 221 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 NCOA6Q14686 2063 aaPredicted RBP6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 hADV38S2A0JD32 116 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 WIPF3A6NGB9 483 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 TNFAIP6P98066 277 aaPredicted RBP6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 COX19Q49B96 90 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 ZNF525Q8N782 197 aa6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 GTF3AQ92664 365 aaKnown RBP6.98□□□□□ -1.29
PRKAB1-207ENST00000542698 E9PLN8 166 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 MGST3O14880 152 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 ELOBQ15370 118 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 HLA-DRB5Q30154 266 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 MOGAT3Q86VF5 341 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 KLF14Q8TD94 323 aaPredicted RBP6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 WIPI2Q9Y4P8 454 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 THADAQ6YHU6 1953 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 J3QR06 171 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 HIST1H2BKO60814 126 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 HIST1H2BJP06899 126 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 HIST1H2BOP23527 126 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms