RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 EPHA1P21709 976 aa9.04□□□□□ -0.96
SCG3-202ENST00000542355 DUTP33316 252 aaKnown RBP9.04□□□□□ -0.96
SCG3-202ENST00000542355 EFNA4P52798 201 aa9.04□□□□□ -0.96
SCG3-202ENST00000542355 AKR1C2P52895 323 aa9.04□□□□□ -0.96
SCG3-202ENST00000542355 OR2F1Q13607 317 aa9.04□□□□□ -0.96
SCG3-202ENST00000542355 TMEM30BQ3MIR4 351 aa9.04□□□□□ -0.96
SCG3-202ENST00000542355 TMEM155Q4W5P6 130 aa9.04□□□□□ -0.96
SCG3-202ENST00000542355 NCR3LG1Q68D85 454 aa9.04□□□□□ -0.96
SCG3-202ENST00000542355 THOC7Q6I9Y2 204 aaKnown RBP9.04□□□□□ -0.96
SCG3-202ENST00000542355 TEX261Q6UWH6 196 aa9.04□□□□□ -0.96
SCG3-202ENST00000542355 FAM71E2Q8N5Q1 922 aa9.04□□□□□ -0.96
SCG3-202ENST00000542355 RRNAD1Q96FB5 475 aaKnown RBP9.04□□□□□ -0.96
SCG3-202ENST00000542355 NEIL1Q96FI4 390 aaPredicted RBP9.04□□□□□ -0.96
SCG3-202ENST00000542355 U3KQ87 197 aa9.04□□□□□ -0.96
SCG3-202ENST00000542355 SAA2-SAA4A0A096LPE2 208 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 CLEC18AA5D8T8 446 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 ST8SIA3O43173 380 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 NXPH3O95157 252 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 KRASP01116 189 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 IGKV1-5P01602 117 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 SAA2P0DJI9 122 aaPredicted RBP9.03□□□□□ -0.96
SCG3-202ENST00000542355 GPR6P46095 362 aaPredicted RBP9.03□□□□□ -0.96
SCG3-202ENST00000542355 TLE4Q04727 773 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 ESCO2Q56NI9 601 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 CXorf66Q5JRM2 361 aaPredicted RBP9.03□□□□□ -0.96
SCG3-202ENST00000542355 WDR25Q64LD2 544 aaPredicted RBP9.03□□□□□ -0.96
SCG3-202ENST00000542355 Q6ZRM9 215 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 SLC25A48Q6ZT89 311 aaKnown RBP9.03□□□□□ -0.96
SCG3-202ENST00000542355 ODF3L1Q8IXM7 274 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 KCNRGQ8N5I3 272 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 CLEC18CQ8NCF0 446 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 GAB2Q9UQC2 676 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 TANC2Q9HCD6 1990 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 DCHS2Q6V1P9 2916 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 ZNF462Q96JM2 2506 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 A1L4Q6 167 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 MSGN1A6NI15 193 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 OVOL3O00110 214 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 CFDP00746 253 aaPredicted RBP9.03□□□□□ -0.96
SCG3-202ENST00000542355 NUP62P37198 522 aaPredicted RBP9.03□□□□□ -0.96
SCG3-202ENST00000542355 NKX2-1P43699 371 aaPredicted RBP9.03□□□□□ -0.96
SCG3-202ENST00000542355 ZNF345Q14585 488 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 C11orf42Q8N5U0 333 aa9.03□□□□□ -0.96
SCG3-202ENST00000542355 LSM10Q969L4 123 aaKnown RBP9.03□□□□□ -0.96
SCG3-202ENST00000542355 FCGR3BO75015 233 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 S1PR2O95136 353 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 G6PCP35575 357 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 DLX6P56179 175 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 POLR2GP62487 172 aaKnown RBP eCLIP9.02□□□□□ -0.97
SCG3-202ENST00000542355 GNB2P62879 340 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 ZNF680Q8NEM1 530 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 RAB39BQ96DA2 213 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 ZNF251Q9BRH9 671 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 MAGT1Q9H0U3 335 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 PATZ1Q9HBE1 687 aaKnown RBP9.02□□□□□ -0.97
SCG3-202ENST00000542355 ZFP57Q9NU63 452 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 POMT1Q9Y6A1 747 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 PPIAL4CA0A0B4J2A2 164 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 A0A1B0GU03 582 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 KANTRA0A1W2PQU2 76 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 SNRNP70P08621 437 aaKnown RBP9.02□□□□□ -0.97
SCG3-202ENST00000542355 PPIAL4GP0DN37 164 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 IGHV1-8P0DP01 117 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 SP5Q6BEB4 398 aaPredicted RBP9.02□□□□□ -0.97
SCG3-202ENST00000542355 ZNF525Q8N782 197 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 TCTEX1D1Q8N7M0 179 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 CD300LFQ8TDQ1 290 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 S1PR3Q99500 378 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 WNT10AQ9GZT5 417 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 ZC4H2Q9NQZ6 224 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 CACNG5Q9UF02 275 aa9.02□□□□□ -0.97
SCG3-202ENST00000542355 RCL1Q9Y2P8 373 aaKnown RBP9.02□□□□□ -0.97
SCG3-202ENST00000542355 E5RGE8 158 aa9.01□□□□□ -0.97
SCG3-202ENST00000542355 HKR1P10072 659 aa9.01□□□□□ -0.97
SCG3-202ENST00000542355 SLC25A6P12236 298 aa9.01□□□□□ -0.97
SCG3-202ENST00000542355 DLX1P56177 255 aa9.01□□□□□ -0.97
SCG3-202ENST00000542355 ID3Q02535 119 aa9.01□□□□□ -0.97
SCG3-202ENST00000542355 ZNF767PQ75MW2 155 aa9.01□□□□□ -0.97
SCG3-202ENST00000542355 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.01□□□□□ -0.97
SCG3-202ENST00000542355 AQP10Q96PS8 301 aa9.01□□□□□ -0.97
SCG3-202ENST00000542355 CCL19Q99731 98 aa9.01□□□□□ -0.97
SCG3-202ENST00000542355 ZFAND3Q9H8U3 227 aa9.01□□□□□ -0.97
SCG3-202ENST00000542355 NSG2Q9Y328 171 aa9.01□□□□□ -0.97
SCG3-202ENST00000542355 PRELID3BQ9Y3B1 194 aa9.01□□□□□ -0.97
SCG3-202ENST00000542355 MMP24Q9Y5R2 645 aa9.01□□□□□ -0.97
SCG3-202ENST00000542355 J3QR06 171 aa9□□□□□ -0.97
SCG3-202ENST00000542355 BCL2L11O43521 198 aa9□□□□□ -0.97
SCG3-202ENST00000542355 PITX3O75364 302 aa9□□□□□ -0.97
SCG3-202ENST00000542355 RPL12P30050 165 aaKnown RBP9□□□□□ -0.97
SCG3-202ENST00000542355 PRB3Q04118 309 aaPredicted RBP9□□□□□ -0.97
SCG3-202ENST00000542355 SLC51BQ86UW2 128 aa9□□□□□ -0.97
SCG3-202ENST00000542355 ABHD12Q8N2K0 398 aa9□□□□□ -0.97
SCG3-202ENST00000542355 DMBX1Q8NFW5 382 aa9□□□□□ -0.97
SCG3-202ENST00000542355 OR10X1Q8NGY0 326 aa9□□□□□ -0.97
SCG3-202ENST00000542355 RBMXL1Q96E39 390 aaKnown RBP9□□□□□ -0.97
SCG3-202ENST00000542355 SSBP3Q9BWW4 388 aaPredicted RBP9□□□□□ -0.97
SCG3-202ENST00000542355 FAM212BQ9NTI7 297 aaPredicted RBP9□□□□□ -0.97
SCG3-202ENST00000542355 USF3Q68DE3 2245 aa9□□□□□ -0.97
SCG3-202ENST00000542355 C22orf46C9J442 243 aa9□□□□□ -0.97
SCG3-202ENST00000542355 SSSCA1O60232 199 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms