RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ARMCX1Q9P291 453 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 XCL2Q9UBD3 114 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 OPTCQ9UBM4 332 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 RSL24D1Q9UHA3 163 aaKnown RBP4.33□□□□□ -1.72
DDB1-219ENST00000541513 DOCK10Q96BY6 2186 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 MED13Q9UHV7 2174 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 NUP210LQ5VU65 1888 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 EPG5Q9HCE0 2579 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 TGIF2-C20orf24A0A0A6YYL0 155 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 TRAV8-4A0A0B4J246 113 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 IGKV1D-13A0A0B4J2D9 117 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 A0A0G2JRQ6 117 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 DNAJC9-AS1A6NH13 148 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 OR5H14A6NHG9 310 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 A8MT66 165 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 C12orf77C9JDV5 145 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 FAAHO00519 579 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 ZZEF1O43149 2961 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 SPAG7O75391 227 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 TRMUO75648 421 aaKnown RBP4.32□□□□□ -1.72
DDB1-219ENST00000541513 PTHP01270 115 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 IGLV2-14P01704 120 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 P01737 135 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 IGKV1-13P0DP09 117 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 CD99P14209 185 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 HIST1H1TP22492 207 aaPredicted RBP4.32□□□□□ -1.72
DDB1-219ENST00000541513 OR3A4PP47883 348 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 EVX1P49640 407 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 SRPXP78539 464 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 PRR3P79522 188 aaKnown RBP4.32□□□□□ -1.72
DDB1-219ENST00000541513 MRPS10P82664 201 aaKnown RBP4.32□□□□□ -1.72
DDB1-219ENST00000541513 TAF9Q16594 264 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 MICAQ29983 383 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 ZNF678Q5SXM1 525 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 LAMTOR1Q6IAA8 161 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 MRPL55Q7Z7F7 128 aaKnown RBP4.32□□□□□ -1.72
DDB1-219ENST00000541513 COMMD7Q86VX2 200 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 C6orf223Q8N319 242 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 C12orf45Q8N5I9 185 aaPredicted RBP4.32□□□□□ -1.72
DDB1-219ENST00000541513 TMEM178AQ8NBL3 297 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 NPRL2Q8WTW4 380 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 PPCDCQ96CD2 204 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 ZNF501Q96CX3 271 aaPredicted RBP4.32□□□□□ -1.72
DDB1-219ENST00000541513 BTF3L4Q96K17 158 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 ZNF354BQ96LW1 612 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 RDH12Q96NR8 316 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 OR2A5Q96R48 311 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 EFCAB11Q9BUY7 163 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 MROQ9BYG7 248 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 TMPRSS5Q9H3S3 457 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 RPF2Q9H7B2 306 aaKnown RBP4.32□□□□□ -1.72
DDB1-219ENST00000541513 FAM60AQ9NP50 221 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 DNAJC27Q9NZQ0 273 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 OR1A1Q9P1Q5 309 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 PCTPQ9UKL6 214 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 KLK13Q9UKR3 277 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 SSR3Q9UNL2 185 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 NUP214P35658 2090 aaPredicted RBP4.32□□□□□ -1.72
DDB1-219ENST00000541513 USP24Q9UPU5 2620 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 PKD1L2Q7Z442 2459 aa4.32□□□□□ -1.72
DDB1-219ENST00000541513 PHF3Q92576 2039 aaKnown RBP4.31□□□□□ -1.72
DDB1-219ENST00000541513 MGAQ8IWI9 3026 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 WDFY3Q8IZQ1 3526 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 IGHV3OR16-9A0A0B4J2B5 98 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 TRGV8A0A0C4DH27 118 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 C20orf202A1L168 122 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 RBMY1BA6NDE4 496 aaKnown RBP4.31□□□□□ -1.72
DDB1-219ENST00000541513 RBMY1EA6NEQ0 496 aaKnown RBP4.31□□□□□ -1.72
DDB1-219ENST00000541513 E7EQ34 232 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 H0YGG7 62 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 H3BSA7 217 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 H7C1H1 209 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 MFNGO00587 321 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 TCF21O43680 179 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 FOXH1O75593 365 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 SCO1O75880 301 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 C6orf47O95873 294 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 CSF3P09919 207 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 RBMY1DP0C7P1 496 aaKnown RBP4.31□□□□□ -1.72
DDB1-219ENST00000541513 RBMY1A1P0DJD3 496 aaKnown RBP4.31□□□□□ -1.72
DDB1-219ENST00000541513 CCL4P13236 92 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 GNB3P16520 340 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 IGHV1-2P23083 117 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 PSMB9P28065 219 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 GGT2P36268 569 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 PPP3R1P63098 170 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 CD47Q08722 323 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 ZNF763Q0D2J5 394 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 PPP1R1AQ13522 171 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 QPRTQ15274 297 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 RSU1Q15404 277 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 DEFB110Q30KQ9 67 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 CNIH2Q6PI25 160 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 BAIAP2L2Q6UXY1 529 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 VN1R4Q7Z5H5 301 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 CHST4Q8NCG5 386 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 TERB2Q8NHR7 220 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 SEH1LQ96EE3 360 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 PGLYRP3Q96LB9 341 aa4.31□□□□□ -1.72
DDB1-219ENST00000541513 TBX5Q99593 518 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms