RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 C6orf201Q7Z4U5 140 aa20.34■□□□□ 0.85
CHFR-218ENST00000540963 PTX4Q96A99 478 aa20.34■□□□□ 0.85
CHFR-218ENST00000540963 TINAGL1Q9GZM7 467 aaPredicted RBP20.34■□□□□ 0.85
CHFR-218ENST00000540963 PARP12Q9H0J9 701 aaKnown RBP20.34■□□□□ 0.85
CHFR-218ENST00000540963 TRBV6-6A0A0A6YYG2 114 aa20.33■□□□□ 0.85
CHFR-218ENST00000540963 PROP1O75360 226 aa20.33■□□□□ 0.85
CHFR-218ENST00000540963 MAPK3P27361 379 aaPredicted RBP20.33■□□□□ 0.85
CHFR-218ENST00000540963 RPS27AP62979 156 aaKnown RBP20.33■□□□□ 0.85
CHFR-218ENST00000540963 C1orf100Q5SVJ3 147 aa20.33■□□□□ 0.85
CHFR-218ENST00000540963 C11orf54Q9H0W9 315 aaPredicted RBP20.33■□□□□ 0.85
CHFR-218ENST00000540963 KCNK15Q9H427 330 aa20.33■□□□□ 0.85
CHFR-218ENST00000540963 CHMP1AQ9HD42 196 aaPredicted RBP20.33■□□□□ 0.85
CHFR-218ENST00000540963 RETNQ9HD89 108 aa20.33■□□□□ 0.85
CHFR-218ENST00000540963 PEMTQ9UBM1 199 aa20.33■□□□□ 0.85
CHFR-218ENST00000540963 MGAT4AQ9UM21 535 aa20.33■□□□□ 0.85
CHFR-218ENST00000540963 SLC25A17O43808 307 aa20.32■□□□□ 0.84
CHFR-218ENST00000540963 AIREO43918 545 aa20.32■□□□□ 0.84
CHFR-218ENST00000540963 CNIH1O95406 144 aa20.32■□□□□ 0.84
CHFR-218ENST00000540963 APOA2P02652 100 aa20.32■□□□□ 0.84
CHFR-218ENST00000540963 SSBP2P81877 361 aaPredicted RBP20.32■□□□□ 0.84
CHFR-218ENST00000540963 RPEL1Q2QD12 228 aa20.32■□□□□ 0.84
CHFR-218ENST00000540963 TM2D1Q9BX74 207 aa20.32■□□□□ 0.84
CHFR-218ENST00000540963 TMEM59Q9BXS4 323 aa20.32■□□□□ 0.84
CHFR-218ENST00000540963 TPPPO94811 219 aa20.31■□□□□ 0.84
CHFR-218ENST00000540963 CEACAM6P40199 344 aa20.31■□□□□ 0.84
CHFR-218ENST00000540963 LGALS7P47929 136 aa20.31■□□□□ 0.84
CHFR-218ENST00000540963 AQP4P55087 323 aa20.31■□□□□ 0.84
CHFR-218ENST00000540963 QRFPP83859 136 aa20.31■□□□□ 0.84
CHFR-218ENST00000540963 ZNF383Q8NA42 475 aa20.31■□□□□ 0.84
CHFR-218ENST00000540963 DRAXINQ8NBI3 349 aaPredicted RBP20.31■□□□□ 0.84
CHFR-218ENST00000540963 SNAPC3Q92966 411 aa20.31■□□□□ 0.84
CHFR-218ENST00000540963 GFI1Q99684 422 aa20.31■□□□□ 0.84
CHFR-218ENST00000540963 ZNF221Q9UK13 617 aa20.31■□□□□ 0.84
CHFR-218ENST00000540963 IZUMO1RA6ND01 250 aa20.3■□□□□ 0.84
CHFR-218ENST00000540963 SNRPBP14678 240 aaKnown RBP20.3■□□□□ 0.84
CHFR-218ENST00000540963 SPHARQ15513 63 aa20.3■□□□□ 0.84
CHFR-218ENST00000540963 BVESQ8NE79 360 aa20.3■□□□□ 0.84
CHFR-218ENST00000540963 KCNG3Q8TAE7 436 aa20.3■□□□□ 0.84
CHFR-218ENST00000540963 MND1Q9BWT6 205 aa20.3■□□□□ 0.84
CHFR-218ENST00000540963 PLEKHA3Q9HB20 300 aa20.3■□□□□ 0.84
CHFR-218ENST00000540963 SLC2A8Q9NY64 477 aa20.3■□□□□ 0.84
CHFR-218ENST00000540963 HTR2CP28335 458 aa20.29■□□□□ 0.84
CHFR-218ENST00000540963 CD81P60033 236 aa20.29■□□□□ 0.84
CHFR-218ENST00000540963 UNC119Q13432 240 aa20.29■□□□□ 0.84
CHFR-218ENST00000540963 DYRK1AQ13627 763 aa20.29■□□□□ 0.84
CHFR-218ENST00000540963 TMEM91Q6ZNR0 172 aa20.29■□□□□ 0.84
CHFR-218ENST00000540963 MS4A15Q8N5U1 240 aa20.29■□□□□ 0.84
CHFR-218ENST00000540963 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.29■□□□□ 0.84
CHFR-218ENST00000540963 SETD6Q8TBK2 473 aa20.29■□□□□ 0.84
CHFR-218ENST00000540963 FAM110AQ9BQ89 295 aa20.29■□□□□ 0.84
CHFR-218ENST00000540963 NEURL2Q9BR09 285 aa20.29■□□□□ 0.84
CHFR-218ENST00000540963 DUSP21Q9H596 190 aa20.29■□□□□ 0.84
CHFR-218ENST00000540963 PLEKHJ1Q9NW61 149 aa20.29■□□□□ 0.84
CHFR-218ENST00000540963 OR1A1Q9P1Q5 309 aa20.29■□□□□ 0.84
CHFR-218ENST00000540963 A0A0A6YYD4 124 aa20.28■□□□□ 0.84
CHFR-218ENST00000540963 A0A0B4J203 849 aa20.28■□□□□ 0.84
CHFR-218ENST00000540963 CRYGBP07316 175 aa20.28■□□□□ 0.84
CHFR-218ENST00000540963 HLA-DRB3P79483 266 aa20.28■□□□□ 0.84
CHFR-218ENST00000540963 CEACAM19Q7Z692 300 aa20.28■□□□□ 0.84
CHFR-218ENST00000540963 PHYHIPQ92561 330 aa20.28■□□□□ 0.84
CHFR-218ENST00000540963 NICN1Q9BSH3 213 aa20.28■□□□□ 0.84
CHFR-218ENST00000540963 ADAM30Q9UKF2 790 aa20.28■□□□□ 0.84
CHFR-218ENST00000540963 IGLV2-23P01705 113 aa20.27■□□□□ 0.84
CHFR-218ENST00000540963 TRBV12-3P01733 135 aa20.27■□□□□ 0.84
CHFR-218ENST00000540963 UCHL1P09936 223 aa20.27■□□□□ 0.84
CHFR-218ENST00000540963 SRMP19623 302 aa20.27■□□□□ 0.84
CHFR-218ENST00000540963 KRTAP17-1Q9BYP8 105 aa20.27■□□□□ 0.84
CHFR-218ENST00000540963 TMEM14DPA8MWL7 114 aa20.26■□□□□ 0.83
CHFR-218ENST00000540963 PJVKQ0ZLH3 352 aa20.26■□□□□ 0.83
CHFR-218ENST00000540963 LIPKQ5VXJ0 399 aa20.26■□□□□ 0.83
CHFR-218ENST00000540963 GLT8D1Q68CQ7 371 aa20.26■□□□□ 0.83
CHFR-218ENST00000540963 LINC00476Q8WZB0 136 aa20.26■□□□□ 0.83
CHFR-218ENST00000540963 TMEM203Q969S6 136 aa20.26■□□□□ 0.83
CHFR-218ENST00000540963 SLC35D1Q9NTN3 355 aa20.26■□□□□ 0.83
CHFR-218ENST00000540963 COA4Q9NYJ1 87 aa20.26■□□□□ 0.83
CHFR-218ENST00000540963 RBMY1BA6NDE4 496 aaKnown RBP20.25■□□□□ 0.83
CHFR-218ENST00000540963 RBMY1EA6NEQ0 496 aaKnown RBP20.25■□□□□ 0.83
CHFR-218ENST00000540963 RBMY1DP0C7P1 496 aaKnown RBP20.25■□□□□ 0.83
CHFR-218ENST00000540963 LINC00205P59089 165 aa20.25■□□□□ 0.83
CHFR-218ENST00000540963 TPBGQ13641 420 aa20.25■□□□□ 0.83
CHFR-218ENST00000540963 MED22Q15528 200 aa20.25■□□□□ 0.83
CHFR-218ENST00000540963 RBM48Q5RL73 367 aaKnown RBP20.25■□□□□ 0.83
CHFR-218ENST00000540963 ZNF785A8K8V0 405 aa20.24■□□□□ 0.83
CHFR-218ENST00000540963 RPS25P62851 125 aaKnown RBP20.24■□□□□ 0.83
CHFR-218ENST00000540963 TAGLNQ01995 201 aaKnown RBP20.24■□□□□ 0.83
CHFR-218ENST00000540963 CD300EQ496F6 205 aaPredicted RBP20.24■□□□□ 0.83
CHFR-218ENST00000540963 VCXQ9H320 206 aa20.24■□□□□ 0.83
CHFR-218ENST00000540963 Q9N2K0 584 aa20.24■□□□□ 0.83
CHFR-218ENST00000540963 BPNT1O95861 308 aa20.23■□□□□ 0.83
CHFR-218ENST00000540963 HSD17B12Q53GQ0 312 aa20.23■□□□□ 0.83
CHFR-218ENST00000540963 ADAD2Q8NCV1 583 aaKnown RBP20.23■□□□□ 0.83
CHFR-218ENST00000540963 SCN3BQ9NY72 215 aa20.23■□□□□ 0.83
CHFR-218ENST00000540963 AK3Q9UIJ7 227 aa20.23■□□□□ 0.83
CHFR-218ENST00000540963 HSF4Q9ULV5 492 aa20.23■□□□□ 0.83
CHFR-218ENST00000540963 FAM223BA6NKX1 122 aa20.22■□□□□ 0.83
CHFR-218ENST00000540963 FOXI3A8MTJ6 420 aaPredicted RBP20.22■□□□□ 0.83
CHFR-218ENST00000540963 M0R1X1 148 aa20.22■□□□□ 0.83
CHFR-218ENST00000540963 SCTP09683 121 aa20.22■□□□□ 0.83
CHFR-218ENST00000540963 FAM209BQ5JX69 171 aa20.22■□□□□ 0.83
CHFR-218ENST00000540963 FAM223AQ8IWN6 122 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms