RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 OR5H14A6NHG9 310 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 HMX3A6NHT5 357 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 IGLL5B9A064 214 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 C11orf94C9JXX5 98 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 AIPO00170 330 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 BMPR1BO00238 502 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 CCDC22O60826 627 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 OR7C1O76099 320 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-214ENST00000540865 ACTL6BO94805 426 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 CA2P00918 260 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 OR2T7P0C7T2 308 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 CTRB1P17538 263 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 MC5RP33032 325 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 MAP2K4P45985 399 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 LGALS7P47929 136 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 ALKBH1Q13686 389 aaKnown RBP3.38□□□□□ -1.87
SNHG1-214ENST00000540865 FXYD3Q14802 87 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 PSG5Q15238 335 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 RSU1Q15404 277 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 MPV17LQ2QL34 196 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 LGALS9BQ3B8N2 356 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 MORN2Q502X0 79 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 LY6G6FQ5SQ64 297 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 AADACL4Q5VUY2 407 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 TMEM236Q5W0B7 351 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 ZNF57Q68EA5 555 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-214ENST00000540865 CTRB2Q6GPI1 263 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 TRAT1Q6PIZ9 186 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 FAM131AQ6UXB0 335 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 ASCL4Q6XD76 172 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 LINC00596Q86U02 117 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 TMEM61Q8N0U2 210 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 GAPTQ8N292 157 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 STX19Q8N4C7 294 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 OR2G2Q8NGZ5 317 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 OR10AC1Q8NH08 325 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 OR1L1Q8NH94 360 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 GRPEL2Q8TAA5 225 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 THRSPQ92748 146 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 MRPS24Q96EL2 167 aaKnown RBP3.38□□□□□ -1.87
SNHG1-214ENST00000540865 CPNE2Q96FN4 548 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-214ENST00000540865 CLCC1Q96S66 551 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 PARP12Q9H0J9 701 aaKnown RBP3.38□□□□□ -1.87
SNHG1-214ENST00000540865 C11orf68Q9H3H3 251 aaKnown RBP3.38□□□□□ -1.87
SNHG1-214ENST00000540865 ZNF556Q9HAH1 456 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 OR2S2Q9NQN1 319 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 METTL1Q9UBP6 276 aaKnown RBP3.38□□□□□ -1.87
SNHG1-214ENST00000540865 JPT1Q9UK76 154 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 TRAPPC2LQ9UL33 140 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 ST3GAL6Q9Y274 331 aa3.38□□□□□ -1.87
SNHG1-214ENST00000540865 SAA2-SAA4A0A096LPE2 208 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.37□□□□□ -1.87
SNHG1-214ENST00000540865 TRAV25A0A0B4J276 109 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 FAM223BA6NKX1 122 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 HMGB1P1B2RPK0 211 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-214ENST00000540865 H0YJW9 148 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 LGALS9O00182 355 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 GABRPO00591 440 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 GEMIN2O14893 280 aaKnown RBP3.37□□□□□ -1.87
SNHG1-214ENST00000540865 SULT1B1O43704 296 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 PRKYO43930 277 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 SNX3O60493 162 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 YPEL1O60688 119 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 CA11O75493 328 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 SAA2P0DJI9 122 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-214ENST00000540865 CT45A6P0DMU7 189 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 CT45A5P0DMU8 189 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 CT45A7P0DMV0 189 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 CBLN1P23435 193 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 EPHA2P29317 976 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 PRDX6P30041 224 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 OR3A3P47888 321 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 CCR9P51686 369 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 MNAT1P51948 309 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 MFAP2P55001 183 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 RBM11P57052 281 aaKnown RBP3.37□□□□□ -1.87
SNHG1-214ENST00000540865 ADARB1P78563 741 aaKnown RBP3.37□□□□□ -1.87
SNHG1-214ENST00000540865 HTD2P86397 168 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 EFNB1P98172 346 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 ZSCAN26Q16670 478 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 FAM98BQ52LJ0 330 aaKnown RBP3.37□□□□□ -1.87
SNHG1-214ENST00000540865 SOHLH1Q5JUK2 328 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 C6orf141Q5SZD1 244 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 SYT6Q5T7P8 510 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-214ENST00000540865 NXNL2Q5VZ03 156 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 FAM220AQ7Z4H9 259 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 ZNF554Q86TJ5 538 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 NR2C2APQ86WQ0 139 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 GID4Q8IVV7 300 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 SERPINA12Q8IW75 414 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 FAM223AQ8IWN6 122 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 ZNF645Q8N7E2 425 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 POM121L12Q8N7R1 296 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 OR5D14Q8NGL3 314 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 OR13C3Q8NGS6 347 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 OR10K1Q8NGX5 313 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 OR52N1Q8NH53 320 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 TNFAIP8L1Q8WVP5 186 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 YPEL2Q96QA6 119 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 TBX5Q99593 518 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms