RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 FAM216BQ8N7L0 139 aa14.28□□□□□ -0.12
EPB41L3-204ENST00000540638 SLC25A15Q9Y619 301 aa14.28□□□□□ -0.12
EPB41L3-204ENST00000540638 ANKHD1Q8IWZ3 2542 aaKnown RBP14.27□□□□□ -0.12
EPB41L3-204ENST00000540638 H3BQ15 152 aa14.27□□□□□ -0.12
EPB41L3-204ENST00000540638 IGLV2-14P01704 120 aa14.27□□□□□ -0.12
EPB41L3-204ENST00000540638 HMGN3Q15651 99 aa14.27□□□□□ -0.12
EPB41L3-204ENST00000540638 NECAP1Q8NC96 275 aa14.27□□□□□ -0.12
EPB41L3-204ENST00000540638 MRPL37Q9BZE1 423 aaKnown RBP14.27□□□□□ -0.12
EPB41L3-204ENST00000540638 ZNRD1Q9P1U0 126 aa14.27□□□□□ -0.12
EPB41L3-204ENST00000540638 RNF115Q9Y4L5 304 aa14.27□□□□□ -0.12
EPB41L3-204ENST00000540638 FAM215AQ9Y5M1 114 aa14.27□□□□□ -0.12
EPB41L3-204ENST00000540638 DUXBA0A1W2PPF3 345 aa14.27□□□□□ -0.13
EPB41L3-204ENST00000540638 MARCH11A6NNE9 402 aa14.27□□□□□ -0.13
EPB41L3-204ENST00000540638 COX5AP20674 150 aa14.27□□□□□ -0.13
EPB41L3-204ENST00000540638 FLI1Q01543 452 aaPredicted RBP14.27□□□□□ -0.13
EPB41L3-204ENST00000540638 ZNF343Q6P1L6 599 aa14.27□□□□□ -0.13
EPB41L3-204ENST00000540638 GCSAMQ8N6F7 178 aa14.27□□□□□ -0.13
EPB41L3-204ENST00000540638 MAP1LC3B2A6NCE7 125 aa14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 CRYABP02511 175 aaKnown RBP14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 HOXA1P49639 335 aaPredicted RBP14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 NKX6-1P78426 367 aaPredicted RBP14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 HFEQ30201 348 aa14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 SLC35E4Q6ICL7 350 aa14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 POM121Q96HA1 1249 aa14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 S1PR3Q99500 378 aa14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 MAP1LC3BQ9GZQ8 125 aa14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 AURKAIP1Q9NWT8 199 aaPredicted RBP14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 MDKP21741 143 aaPredicted RBP14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 REG1BP48304 166 aa14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 RAB13P51153 203 aa14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 MZT1Q08AG7 82 aa14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 PRR30Q53SZ7 412 aaPredicted RBP14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 DHRS7BQ6IAN0 325 aaPredicted RBP14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 IGKV1D-17A0A075B6S4 117 aa14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 CEACAM1P13688 526 aa14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 TNFSF4P23510 183 aa14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 MEGF10Q96KG7 1140 aa14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 MBNL3Q9NUK0 354 aaKnown RBP14.26□□□□□ -0.13
EPB41L3-204ENST00000540638 ADIRFQ15847 76 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 PDZD11Q5EBL8 140 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 FFAR4Q5NUL3 377 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 CST9LP1Q5W188 147 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 EDARADDQ8WWZ3 215 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 QTRT1Q9BXR0 403 aaKnown RBP14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 J3QW42 95 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 HBE1P02100 147 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 C4orf17Q53FE4 359 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 UTF1Q5T230 341 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 RBMXL3Q8N7X1 1067 aaKnown RBP14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 IL22RA2Q969J5 263 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 RAB39BQ96DA2 213 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 TMEM204Q9BSN7 226 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 PRELID3BQ9Y3B1 194 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 TRGV8A0A0C4DH27 118 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 FAM87AP0C7U9 286 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 ZNF880Q6PDB4 577 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 ODF3L1Q8IXM7 274 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 DYNLRB1Q9NP97 96 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 BIN3Q9NQY0 253 aa14.25□□□□□ -0.13
EPB41L3-204ENST00000540638 DLK1P80370 383 aa14.24□□□□□ -0.13
EPB41L3-204ENST00000540638 TFF3Q07654 80 aa14.24□□□□□ -0.13
EPB41L3-204ENST00000540638 SRSF7Q16629 238 aaKnown RBP eCLIP14.24□□□□□ -0.13
EPB41L3-204ENST00000540638 ABHD12Q8N2K0 398 aa14.24□□□□□ -0.13
EPB41L3-204ENST00000540638 ZNF525Q8N782 197 aa14.24□□□□□ -0.13
EPB41L3-204ENST00000540638 PRSS33Q8NF86 280 aa14.24□□□□□ -0.13
EPB41L3-204ENST00000540638 PATZ1Q9HBE1 687 aaKnown RBP14.24□□□□□ -0.13
EPB41L3-204ENST00000540638 SPG11Q96JI7 2443 aa14.24□□□□□ -0.13
EPB41L3-204ENST00000540638 TRBV6-6A0A0A6YYG2 114 aa14.24□□□□□ -0.13
EPB41L3-204ENST00000540638 SLC31A2O15432 143 aa14.24□□□□□ -0.13
EPB41L3-204ENST00000540638 NQO2P16083 231 aa14.24□□□□□ -0.13
EPB41L3-204ENST00000540638 LSM10Q969L4 123 aaKnown RBP14.24□□□□□ -0.13
EPB41L3-204ENST00000540638 LRRC30A6NM36 301 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 PLXNB1O43157 2135 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 SCAF4O95104 1147 aaKnown RBP14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 TIMM23BQ5SRD1 257 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 COMMD1Q8N668 190 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 C1orf162Q8NEQ5 155 aaPredicted RBP14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 C5orf30Q96GV9 206 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 UNKLQ9H9P5 680 aaKnown RBP14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 ENY2Q9NPA8 101 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 KMT2EQ8IZD2 1858 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 TAF15Q92804 592 aaKnown RBP eCLIP14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 RCC1LQ96I51 464 aaKnown RBP14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 MALRD1Q5VYJ5 2156 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 PIGBOS1A0A0B4J2F0 54 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 A0A0U1RQK1 487 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 MGST3O14880 152 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 HOXB1P14653 301 aaPredicted RBP14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 GZMHP20718 246 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 HNF1AP20823 631 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 SPSB3Q6PJ21 355 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 HAPLN4Q86UW8 402 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 OR4F5Q8NH21 305 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 SSMEM1Q8WWF3 244 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 HIST1H2BAQ96A08 127 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 OR4F4Q96R69 305 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 ARV1Q9H2C2 271 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 CALYQ9NYX4 217 aa14.23□□□□□ -0.13
EPB41L3-204ENST00000540638 KIAA1456Q9P272 454 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms