RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 OR11L1Q8NGX0 322 aa12.89□□□□□ -0.35
GABARAPL1-208ENST00000540424 APH1AQ96BI3 265 aa12.89□□□□□ -0.35
GABARAPL1-208ENST00000540424 RPUSD4Q96CM3 377 aaKnown RBP12.89□□□□□ -0.35
GABARAPL1-208ENST00000540424 RNF2Q99496 336 aa12.89□□□□□ -0.35
GABARAPL1-208ENST00000540424 TMEM222Q9H0R3 208 aa12.89□□□□□ -0.35
GABARAPL1-208ENST00000540424 KLF13Q9Y2Y9 288 aaPredicted RBP12.89□□□□□ -0.35
GABARAPL1-208ENST00000540424 TRAV30A0A087WSZ9 112 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 C3orf85A0A1B0GTC6 90 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 MDH2P40926 338 aaKnown RBP12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 MAGEA5P43359 124 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 RRADP55042 308 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 PPP1CBP62140 327 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 RPL19P84098 196 aaKnown RBP12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 PLA2G2CQ5R387 149 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 MRPL21Q7Z2W9 205 aaKnown RBP12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 MCEMP1Q8IX19 187 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 SAXO1Q8IYX7 474 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 ZNF611Q8N823 705 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 SCGB1C1Q8TD33 95 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 APOBEC3DQ96AK3 386 aaPredicted RBP12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 NCKAP5O14513 1909 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 A0A0U1RQK1 487 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 ZNF320A2RRD8 509 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 FAM166BA8MTA8 275 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 KLRC4-KLRK1H3BQV0 150 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 CD99P14209 185 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 PRSS12P56730 875 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 SERF2P84101 59 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 C1orf174Q8IYL3 243 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 ZNF709Q8N972 641 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 PLPPR1Q8TBJ4 325 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 VSIRQ9H7M9 311 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 ZNF442Q9H7R0 627 aa12.88□□□□□ -0.35
GABARAPL1-208ENST00000540424 MPPED1O15442 326 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 CELA3AP09093 270 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 IGLC2P0DOY2 106 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 IGLC3P0DOY3 106 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 UCP1P25874 307 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 YPEL3P61236 119 aaPredicted RBP12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 SUMO1P63165 101 aaKnown RBP12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 PLP2Q04941 152 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 MSMO1Q15800 293 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 SPATA45Q537H7 98 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 FAM78BQ5VT40 261 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 LINC00696Q6ZRV3 163 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 ZNF695Q8IW36 515 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 TMEM251Q8N6I4 163 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 Q8NFD4 153 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 PINX1Q96BK5 328 aaKnown RBP12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 TP53TG3Q9ULZ0 132 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 PCSK5Q92824 1860 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 SDK2Q58EX2 2172 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 C5orf49A4QMS7 147 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 HS3ST1O14792 307 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 WDR1O75083 606 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 CCNOP22674 350 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 ADMP35318 185 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 LINC00310P59036 64 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 Q6ZN92 141 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 WDR87Q6ZQQ6 2873 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 MRPL30Q8TCC3 161 aaKnown RBP12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 TXN2Q99757 166 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 RSG1Q9BU20 258 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 BET1LQ9NYM9 111 aa12.87□□□□□ -0.35
GABARAPL1-208ENST00000540424 A0A096LPE4 126 aa12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 A0A1W2PPZ6 126 aa12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 PRSS47A8MTI9 375 aa12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 ADAM20O43506 726 aa12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 CHST1O43916 411 aa12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 HYPMO75409 117 aa12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 OR7C1O76099 320 aaPredicted RBP12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 SP1P08047 785 aa12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 PAX9P55771 341 aa12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 HERV-K104P61576 105 aa12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 FOXL1Q12952 345 aa12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 CALHM1Q8IU99 346 aa12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 ZDHHC23Q8IYP9 409 aa12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 SELENOHQ8IZQ5 122 aaKnown RBP12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 NUDT11Q96G61 164 aa12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 HES7Q9BYE0 225 aa12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 PATZ1Q9HBE1 687 aaKnown RBP12.86□□□□□ -0.35
GABARAPL1-208ENST00000540424 PSMB3P49720 205 aa12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 SRSF7Q16629 238 aaKnown RBP eCLIP12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 VHLLQ6RSH7 139 aa12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 MKXQ8IYA7 352 aa12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 Q8N976 141 aa12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 PLA2G3Q9NZ20 509 aa12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 MRPS16Q9Y3D3 137 aaKnown RBP12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 A0A1W2PNU3 283 aaPredicted RBP12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 M0QZ24 198 aa12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 CD46P15529 392 aa12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 TNFSF4P23510 183 aa12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 MEOX1P50221 254 aa12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 CEACAM21Q3KPI0 293 aa12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 C9orf135Q5VTT2 229 aa12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 UNQ5815/PRO19632Q6UWF5 114 aa12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 Q6ZS49 121 aa12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 TUBG2Q9NRH3 451 aa12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 UBE2J1Q9Y385 318 aaPredicted RBP12.85□□□□□ -0.35
GABARAPL1-208ENST00000540424 MLNRO43193 412 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms