RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 IGKV1-13P0DP09 117 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 S100A7P31151 101 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 PLPPR2Q96GM1 343 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 TPPP3Q9BW30 176 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 CACNA1IQ9P0X4 2223 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 WIPF3A6NGB9 483 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 AMY1AP04745 511 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 SP1P08047 785 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 VASH2Q86V25 355 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 GBGT1Q8N5D6 347 aa11.1□□□□□ -0.63
DNMT1-203ENST00000540357 SDK1Q7Z5N4 2213 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 HBZP02008 142 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 NRN1LQ496H8 165 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 NMSQ5H8A3 153 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 OR52L2PQ8NGH6 319 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 LRRC29Q8WV35 223 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 TMEM171Q8WVE6 324 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 OR5P3Q8WZ94 311 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 OR2V2Q96R30 315 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 FREM3P0C091 2139 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 AESQ08117 197 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 LEMD1Q68G75 181 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 ACSM6Q6P461 480 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 IL36BQ9NZH7 164 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 CELA2AP08217 269 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 CAMPP49913 170 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 CYB5R2Q6BCY4 276 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 MMD2Q8IY49 270 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 ABHD5Q8WTS1 349 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 SPSB4Q96A44 273 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 DCAF16Q9NXF7 216 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 PRNDQ9UKY0 176 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 CLDN16Q9Y5I7 305 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 IGLV3-12A0A075B6K2 115 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 ISLRO14498 428 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 EFNA2O43921 213 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 SLC25A5P05141 298 aaKnown RBP11.09□□□□□ -0.63
DNMT1-203ENST00000540357 CT45A10P0DMU9 189 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 CHRNB4P30926 498 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 ARL3P36405 182 aa11.09□□□□□ -0.63
DNMT1-203ENST00000540357 MRPL52Q86TS9 123 aaKnown RBP11.09□□□□□ -0.63
DNMT1-203ENST00000540357 RNASEH2CQ8TDP1 164 aaKnown RBP11.09□□□□□ -0.63
DNMT1-203ENST00000540357 CRYGSP22914 178 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 UCP2P55851 309 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 PCOLCEQ15113 449 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 FA2HQ7L5A8 372 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 ZNF835Q9Y2P0 537 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 S1PR2O95136 353 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 ACSF3Q4G176 576 aaPredicted RBP11.08□□□□□ -0.64
DNMT1-203ENST00000540357 TRGV5A0A0B4J1U4 118 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 HIST1H1EP10412 219 aaKnown RBP11.08□□□□□ -0.64
DNMT1-203ENST00000540357 HIST3H3Q16695 136 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 C1orf194Q5T5A4 169 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 MIC13Q5XKP0 118 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 SPINK14Q6IE38 97 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 LYG1Q8N1E2 194 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 OR2J1Q9GZK6 312 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 CHODLQ9H9P2 273 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 SEC16AO15027 2179 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 GZMBP10144 247 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 CBLN1P23435 193 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 Q56UQ5 140 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 IBA57Q5T440 356 aaKnown RBP11.08□□□□□ -0.64
DNMT1-203ENST00000540357 VSIRQ9H7M9 311 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 TMEM106BQ9NUM4 274 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 CLEC1BQ9P126 229 aa11.08□□□□□ -0.64
DNMT1-203ENST00000540357 COL4A3Q01955 1670 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 IGKV1-12A0A0C4DH73 117 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 IGKV1D-12P01611 117 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 SPEM2Q0P670 501 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 SCGB2A2Q13296 93 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 ACTL10Q5JWF8 245 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 FAM90A2PQ658T7 463 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 SLC25A45Q8N413 288 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 SCCPDHQ8NBX0 429 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 OR2Z1Q8NG97 314 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 OR51G1Q8NGK1 321 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 TMEM45BQ96B21 275 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 MAP1LC3CQ9BXW4 147 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 MRPL37Q9BZE1 423 aaKnown RBP11.07□□□□□ -0.64
DNMT1-203ENST00000540357 SAP30LQ9HAJ7 183 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 A8MWP6 167 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 HINT1P49773 126 aaPredicted RBP11.07□□□□□ -0.64
DNMT1-203ENST00000540357 MEOX1P50221 254 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 SMRP1Q8NCR6 262 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 OR1L1Q8NH94 360 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 NABP1Q96AH0 204 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 PPP1R14DQ9NXH3 145 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 TCFL5Q9UL49 500 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 MARCH11A6NNE9 402 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 J3QR89 54 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 LINC00271P0C7V0 271 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 ZNF664Q8N3J9 261 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 REPIN1Q9BWE0 567 aaKnown RBP11.07□□□□□ -0.64
DNMT1-203ENST00000540357 HES4Q9HCC6 221 aa11.07□□□□□ -0.64
DNMT1-203ENST00000540357 MNX1P50219 401 aaPredicted RBP11.06□□□□□ -0.64
DNMT1-203ENST00000540357 MDP1Q86V88 176 aa11.06□□□□□ -0.64
DNMT1-203ENST00000540357 ZNF784Q8NCA9 323 aaPredicted RBP11.06□□□□□ -0.64
DNMT1-203ENST00000540357 OR2D3Q8NGH3 330 aa11.06□□□□□ -0.64
DNMT1-203ENST00000540357 OR10X1Q8NGY0 326 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms