RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 GLIPR1L1Q6UWM5 242 aa8.77□□□□□ -1.01
CLSTN3-209ENST00000539982 NANOGP1Q8N7R0 232 aa8.77□□□□□ -1.01
CLSTN3-209ENST00000539982 GRPEL2Q8TAA5 225 aa8.77□□□□□ -1.01
CLSTN3-209ENST00000539982 MRPL30Q8TCC3 161 aaKnown RBP8.77□□□□□ -1.01
CLSTN3-209ENST00000539982 NDUFA13Q9P0J0 144 aa8.77□□□□□ -1.01
CLSTN3-209ENST00000539982 STEAP1Q9UHE8 339 aa8.77□□□□□ -1.01
CLSTN3-209ENST00000539982 KMT2AQ03164 3969 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 SMIM31A0A1B0GVY4 71 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 TRBV12-3P01733 135 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 LIMS3P0CW19 117 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 LIMS4P0CW20 117 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 IGFBP3P17936 291 aaPredicted RBP8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 PSMB9P28065 219 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 DYRK1AQ13627 763 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 PMS2P11Q13670 270 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 SPHARQ15513 63 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 MED22Q15528 200 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 CCDC58Q4VC31 144 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 SIGIRRQ6IA17 410 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 RPL22L1Q6P5R6 122 aaKnown RBP8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 CEMP1Q6PRD7 247 aaPredicted RBP8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 TMPRSS11AQ6ZMR5 421 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 BVESQ8NE79 360 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 OR13F1Q8NGS4 319 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 SNAPC3Q92966 411 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 ORAI1Q96D31 301 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 USMG5Q96IX5 58 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 TMEM68Q96MH6 324 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 OR14A2Q96R54 314 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 TSNAXQ99598 290 aaKnown RBP8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 OVOL2Q9BRP0 275 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 SELENOIQ9C0D9 397 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 TINAGL1Q9GZM7 467 aaPredicted RBP8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 BANF2Q9H503 90 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 LSM2Q9Y333 95 aaKnown RBP8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 RYR1P21817 5038 aa8.76□□□□□ -1.01
CLSTN3-209ENST00000539982 SPDEFO95238 335 aa8.75□□□□□ -1.01
CLSTN3-209ENST00000539982 HSMCR30P0CW71 290 aa8.75□□□□□ -1.01
CLSTN3-209ENST00000539982 MGMTP16455 207 aa8.75□□□□□ -1.01
CLSTN3-209ENST00000539982 WNT4P56705 351 aa8.75□□□□□ -1.01
CLSTN3-209ENST00000539982 RPS16P62249 146 aaKnown RBP8.75□□□□□ -1.01
CLSTN3-209ENST00000539982 HMGN3Q15651 99 aa8.75□□□□□ -1.01
CLSTN3-209ENST00000539982 DEFB114Q30KQ6 69 aa8.75□□□□□ -1.01
CLSTN3-209ENST00000539982 OR2G6Q5TZ20 316 aa8.75□□□□□ -1.01
CLSTN3-209ENST00000539982 IL1F10Q8WWZ1 152 aa8.75□□□□□ -1.01
CLSTN3-209ENST00000539982 CYYR1Q96J86 154 aa8.75□□□□□ -1.01
CLSTN3-209ENST00000539982 WFDC10AQ9H1F0 79 aa8.75□□□□□ -1.01
CLSTN3-209ENST00000539982 ABRACLQ9P1F3 81 aa8.75□□□□□ -1.01
CLSTN3-209ENST00000539982 A0A0B4J203 849 aa8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 PDCD6O75340 191 aa8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 IGKV1-16P04430 117 aa8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 CPEP16870 476 aa8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 LGALS7P47929 136 aa8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 SSBP2P81877 361 aaPredicted RBP8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 MLLT11Q13015 90 aaPredicted RBP8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 JAGN1Q8N5M9 183 aa8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 ZNF485Q8NCK3 441 aa8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 GATAD1Q8WUU5 269 aa8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 KCTD12Q96CX2 325 aaKnown RBP8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 ABHD14BQ96IU4 210 aa8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 Q96M66 194 aa8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 MGLLQ99685 303 aa8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 AGMATQ9BSE5 352 aa8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 PARP12Q9H0J9 701 aaKnown RBP8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 RBM38Q9H0Z9 239 aaKnown RBP8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 CKLFQ9UBR5 152 aa8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 KLK5Q9Y337 293 aaPredicted RBP8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 KIAA1109Q2LD37 5005 aa8.74□□□□□ -1.01
CLSTN3-209ENST00000539982 CCDC160A6NGH7 325 aa8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 ITGB1BP1O14713 200 aa8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 PROP1O75360 226 aa8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 CRTAPO75718 401 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 KIR2DS2P43631 304 aa8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 DEFA5Q01523 94 aa8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 GUCA2BQ16661 112 aa8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 GPR107Q5VW38 600 aa8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 AWAT2Q6E213 333 aa8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 CLVS1Q8IUQ0 354 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 CDH26Q8IXH8 852 aa8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 DRAXINQ8NBI3 349 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 DYNLRB2Q8TF09 96 aa8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 DGCR14Q96DF8 476 aaKnown RBP8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 YIPF6Q96EC8 236 aa8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 ZC4H2Q9NQZ6 224 aa8.73□□□□□ -1.01
CLSTN3-209ENST00000539982 DNAH10Q8IVF4 4471 aa8.72□□□□□ -1.01
CLSTN3-209ENST00000539982 TRAV8-7A0A075B6U6 113 aa8.72□□□□□ -1.01
CLSTN3-209ENST00000539982 A0A0J9YWU9 116 aa8.72□□□□□ -1.01
CLSTN3-209ENST00000539982 TRBV5-5A0A0J9YX44 114 aa8.72□□□□□ -1.01
CLSTN3-209ENST00000539982 OGG1O15527 345 aa8.72□□□□□ -1.01
CLSTN3-209ENST00000539982 NOL3O60936 208 aaKnown RBP8.72□□□□□ -1.01
CLSTN3-209ENST00000539982 DEDDO75618 318 aa8.72□□□□□ -1.01
CLSTN3-209ENST00000539982 NDUFB8O95169 186 aa8.72□□□□□ -1.01
CLSTN3-209ENST00000539982 CD36P16671 472 aa8.72□□□□□ -1.01
CLSTN3-209ENST00000539982 TAS2R43P59537 309 aa8.72□□□□□ -1.01
CLSTN3-209ENST00000539982 EWSR1Q01844 656 aaKnown RBP eCLIP8.72□□□□□ -1.01
CLSTN3-209ENST00000539982 TNFRSF9Q07011 255 aa8.72□□□□□ -1.01
CLSTN3-209ENST00000539982 PJVKQ0ZLH3 352 aa8.72□□□□□ -1.01
CLSTN3-209ENST00000539982 LGALS9CQ6DKI2 356 aa8.72□□□□□ -1.01
CLSTN3-209ENST00000539982 SLC16A13Q7RTY0 426 aa8.72□□□□□ -1.01
CLSTN3-209ENST00000539982 PDPNQ86YL7 162 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms