RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 TNFSF15O95150 251 aa11.12□□□□□ -0.63
UBE3B-209ENST00000539584 FOSL1P15407 271 aa11.12□□□□□ -0.63
UBE3B-209ENST00000539584 CNN1P51911 297 aaKnown RBP11.12□□□□□ -0.63
UBE3B-209ENST00000539584 PAX5Q02548 391 aa11.12□□□□□ -0.63
UBE3B-209ENST00000539584 MEGF10Q96KG7 1140 aa11.12□□□□□ -0.63
UBE3B-209ENST00000539584 CLN8Q9UBY8 286 aa11.12□□□□□ -0.63
UBE3B-209ENST00000539584 WDR83OSQ9Y284 106 aa11.12□□□□□ -0.63
UBE3B-209ENST00000539584 TRAV9-1A0A075B6T8 112 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 TRAV39A0A0B4J263 110 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 FAM166BA8MTA8 275 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 C12orf77C9JDV5 145 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 ZG16O60844 167 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 OR3A1P47881 315 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 HNF4GQ14541 408 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 SLC10A1Q14973 349 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 Q3ZCU0 254 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 ZNF664Q8N3J9 261 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 NECAP1Q8NC96 275 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 PRO1933Q9H354 126 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 S1PR2O95136 353 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 HBZP02008 142 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 ADH4P08319 380 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 CD1BP29016 333 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 RPL30P62888 115 aaKnown RBP11.11□□□□□ -0.63
UBE3B-209ENST00000539584 ZNF816Q0VGE8 651 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-209ENST00000539584 LINC01551Q86U37 167 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 OR52E5Q8NH55 327 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 MAFAQ8NHW3 353 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-209ENST00000539584 GMPPAQ96IJ6 420 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-209ENST00000539584 TMEM204Q9BSN7 226 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 FUT9Q9Y231 359 aa11.11□□□□□ -0.63
UBE3B-209ENST00000539584 PDGFBP01127 241 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-209ENST00000539584 SP1P08047 785 aa11.1□□□□□ -0.63
UBE3B-209ENST00000539584 ZNF883P0CG24 379 aa11.1□□□□□ -0.63
UBE3B-209ENST00000539584 TMPRSS3P57727 454 aa11.1□□□□□ -0.63
UBE3B-209ENST00000539584 UBE2NP61088 152 aaKnown RBP11.1□□□□□ -0.63
UBE3B-209ENST00000539584 HTD2P86397 168 aa11.1□□□□□ -0.63
UBE3B-209ENST00000539584 ZXDAP98168 799 aa11.1□□□□□ -0.63
UBE3B-209ENST00000539584 PDLIM3Q53GG5 364 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-209ENST00000539584 DCAF10Q5QP82 559 aa11.1□□□□□ -0.63
UBE3B-209ENST00000539584 TMEM144Q7Z5S9 345 aa11.1□□□□□ -0.63
UBE3B-209ENST00000539584 OR1L1Q8NH94 360 aa11.1□□□□□ -0.63
UBE3B-209ENST00000539584 OR2J1Q9GZK6 312 aa11.1□□□□□ -0.63
UBE3B-209ENST00000539584 A0A1W2PPV4 95 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 PATE3B3GLJ2 98 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 ZNHIT1O43257 154 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 PSPNO60542 156 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 OPRK1P41145 380 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 P2RY6Q15077 328 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 SPATA46Q5T0L3 261 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 TMEM164Q5U3C3 297 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 INO80CQ6PI98 192 aaPredicted RBP11.09□□□□□ -0.63
UBE3B-209ENST00000539584 GBGT1Q8N5D6 347 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 TMEM37Q8WXS4 190 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 OR51B6Q9H340 312 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 CNTRLQ7Z7A1 2325 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 A0A1B0GV90 55 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 MARCH11A6NNE9 402 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 C17orf98A8MV24 154 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 RBMXL2O75526 392 aaKnown RBP11.09□□□□□ -0.63
UBE3B-209ENST00000539584 MEOX1P50221 254 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 BRWD1-AS2P59051 145 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 TFF3Q07654 80 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 WDYHV1Q96HA8 205 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 ELOVL1Q9BW60 279 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 PXMP4Q9Y6I8 212 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 MYO15AQ9UKN7 3530 aa11.09□□□□□ -0.63
UBE3B-209ENST00000539584 HMGB3O15347 200 aaKnown RBP11.08□□□□□ -0.64
UBE3B-209ENST00000539584 ST8SIA5O15466 376 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 RBFOX2O43251 390 aaKnown RBP eCLIP11.08□□□□□ -0.64
UBE3B-209ENST00000539584 LAMTOR5O43504 91 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 HPRT1P00492 218 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 SPCS3P61009 180 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 RPL15P61313 204 aaKnown RBP11.08□□□□□ -0.64
UBE3B-209ENST00000539584 RTP5Q14D33 572 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 SSX2Q16385 188 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 MRPL52Q86TS9 123 aaKnown RBP11.08□□□□□ -0.64
UBE3B-209ENST00000539584 MRPL41Q8IXM3 137 aaKnown RBP11.08□□□□□ -0.64
UBE3B-209ENST00000539584 C1orf174Q8IYL3 243 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 OR52L2PQ8NGH6 319 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 SLC25A40Q8TBP6 338 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 HES7Q9BYE0 225 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 CXXC4Q9H2H0 198 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 C12orf49Q9H741 205 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 TRAPPC1Q9Y5R8 145 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 TRIOO75962 3097 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 C15orf62A8K5M9 175 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 ZNF705GA8MUZ8 300 aaPredicted RBP11.08□□□□□ -0.64
UBE3B-209ENST00000539584 SPINT2O43291 252 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 CD46P15529 392 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 IL3RAP26951 378 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 SOX8P57073 446 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 YPEL3P61236 119 aaPredicted RBP11.08□□□□□ -0.64
UBE3B-209ENST00000539584 PMP22Q01453 160 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 MZT1Q08AG7 82 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 PSG7Q13046 419 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 ACP7Q6ZNF0 438 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 ZNF808Q8N4W9 903 aaPredicted RBP11.08□□□□□ -0.64
UBE3B-209ENST00000539584 Q8N7P7 452 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 MDS2Q8NDY4 140 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms