RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 OR10A7Q8NGE5 316 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 OR52E5Q8NH55 327 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 OR4S2Q8NH73 311 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 DTD1Q8TEA8 209 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 TAF15Q92804 592 aaKnown RBP eCLIP5.52□□□□□ -1.53
USP28-206ENST00000538224 R3HDM4Q96D70 268 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 RAB39BQ96DA2 213 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 AGMATQ9BSE5 352 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 ABHD14AQ9BUJ0 271 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 WDR61Q9GZS3 305 aaKnown RBP5.52□□□□□ -1.53
USP28-206ENST00000538224 EGLN1Q9GZT9 426 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 TUBA4BQ9H853 241 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 GCM1Q9NP62 436 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 KCNIP2Q9NS61 270 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 GFOD1Q9NXC2 390 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 JKAMPQ9P055 326 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 FBXO7Q9Y3I1 522 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 PRRC2CQ9Y520 2896 aaKnown RBP5.52□□□□□ -1.53
USP28-206ENST00000538224 DYSFO75923 2080 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 IGHV3OR15-7A0A075B7D8 119 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 IGHV3-43A0A0B4J1X8 118 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 TRAV38-1A0A0B4J264 116 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 TRGV8A0A0C4DH27 118 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 A0A0G2JNJ9 132 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 KBTBD11-OT1A0A1B0GTJ5 212 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 UBE2L5PA0A1B0GUS4 154 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 hADV38S2A0JD32 116 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 ZNF98A6NK75 572 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 C17orf98A8MV24 154 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 C3orf80F5H4A9 247 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 M0R1X1 148 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 SIGLEC5O15389 551 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 NUPL2O15504 423 aaKnown RBP5.51□□□□□ -1.53
USP28-206ENST00000538224 RAMP3O60896 148 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 MPDU1O75352 247 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 C1QL1O75973 258 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 IGHV3-43DP0DP04 118 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 NQO2P16083 231 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 CCKARP32238 428 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 ID4P47928 161 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 HOXA1P49639 335 aaPredicted RBP5.51□□□□□ -1.53
USP28-206ENST00000538224 FHITP49789 147 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 ASCL1P50553 236 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 CASP6P55212 293 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 TMPRSS3P57727 454 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 SPCS3P61009 180 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 RPL30P62888 115 aaKnown RBP5.51□□□□□ -1.53
USP28-206ENST00000538224 RUNX1Q01196 453 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 FAM27E3Q08E93 113 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 FOXC1Q12948 553 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 TBR1Q16650 682 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 MSMPQ1L6U9 139 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 VWC2Q2TAL6 325 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 PDLIM3Q53GG5 364 aaPredicted RBP5.51□□□□□ -1.53
USP28-206ENST00000538224 OR2B11Q5JQS5 317 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 AVPI1Q5T686 147 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 SPSB3Q6PJ21 355 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 BTNL3Q6UXE8 466 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 ZNF788Q6ZQV5 615 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 ASCL5Q7RTU5 278 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 ZNF709Q8N972 641 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 OR4A16Q8NH70 328 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 SFT2D1Q8WV19 159 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 MBD3L1Q8WWY6 194 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 CORO2AQ92828 525 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 C5orf30Q96GV9 206 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 S1PR3Q99500 378 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 P2RX4Q99571 388 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 ZNF251Q9BRH9 671 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 GGACTQ9BVM4 153 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 SCRT1Q9BWW7 348 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 IFI27L2Q9H2X8 130 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 GAL3ST2Q9H3Q3 398 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 LINC00574Q9H8X3 128 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 IDI2-AS1Q9NZ38 188 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 CLN8Q9UBY8 286 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 Q9UFV3 132 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 MLXQ9UH92 298 aa5.51□□□□□ -1.53
USP28-206ENST00000538224 HCFC1P51610 2035 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 DMXL1Q9Y485 3027 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 A0A087WWC5 75 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 LOC102723971A0A1B0GUV8 181 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 LINC00473A8K010 186 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 C17orf100A8MU93 164 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 B4DEV8 164 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 K7EM74 188 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 M0R036 132 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 GPR37O15354 613 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 ZG16O60844 167 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 FCGR3BO75015 233 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 HRASP01112 189 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 IFNA17P01571 189 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 MT-ND4LP03901 98 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 CGB3P0DN86 165 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 CGB7P0DN87 165 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 FOLR2P14207 255 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 DAOP14920 347 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 LOXL3P58215 753 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 RAB11AP62491 216 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 GNB2P62879 340 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms