RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 C5orf30Q96GV9 206 aa13.22□□□□□ -0.29
LTBR-206ENST00000536876 NEURL2Q9BR09 285 aa13.22□□□□□ -0.29
LTBR-206ENST00000536876 TM2D1Q9BX74 207 aa13.22□□□□□ -0.29
LTBR-206ENST00000536876 TRBV6-6A0A0A6YYG2 114 aa13.21□□□□□ -0.29
LTBR-206ENST00000536876 IGKV1-6A0A0C4DH72 117 aa13.21□□□□□ -0.29
LTBR-206ENST00000536876 BMPR1BO00238 502 aa13.21□□□□□ -0.29
LTBR-206ENST00000536876 OR2A4O95047 310 aa13.21□□□□□ -0.29
LTBR-206ENST00000536876 TAS2R43P59537 309 aa13.21□□□□□ -0.29
LTBR-206ENST00000536876 RPS16P62249 146 aaKnown RBP13.21□□□□□ -0.29
LTBR-206ENST00000536876 HLA-DRB3P79483 266 aa13.21□□□□□ -0.29
LTBR-206ENST00000536876 QRFPP83859 136 aa13.21□□□□□ -0.29
LTBR-206ENST00000536876 MOB1BQ7L9L4 216 aa13.21□□□□□ -0.29
LTBR-206ENST00000536876 PTX4Q96A99 478 aa13.21□□□□□ -0.29
LTBR-206ENST00000536876 CHMP1AQ9HD42 196 aaPredicted RBP13.21□□□□□ -0.29
LTBR-206ENST00000536876 GHRLQ9UBU3 117 aa13.21□□□□□ -0.29
LTBR-206ENST00000536876 APELAP0DMC3 54 aa13.2□□□□□ -0.3
LTBR-206ENST00000536876 ST3GAL4Q11206 333 aa13.2□□□□□ -0.3
LTBR-206ENST00000536876 LRRTM1Q86UE6 522 aa13.2□□□□□ -0.3
LTBR-206ENST00000536876 SETD9Q8NE22 299 aa13.2□□□□□ -0.3
LTBR-206ENST00000536876 OR2K2Q8NGT1 345 aa13.2□□□□□ -0.3
LTBR-206ENST00000536876 SETD6Q8TBK2 473 aa13.2□□□□□ -0.3
LTBR-206ENST00000536876 GGHQ92820 318 aa13.2□□□□□ -0.3
LTBR-206ENST00000536876 TMEM59Q9BXS4 323 aa13.2□□□□□ -0.3
LTBR-206ENST00000536876 SRD5A3Q9H8P0 318 aa13.2□□□□□ -0.3
LTBR-206ENST00000536876 SCTP09683 121 aa13.19□□□□□ -0.3
LTBR-206ENST00000536876 AADACP22760 399 aa13.19□□□□□ -0.3
LTBR-206ENST00000536876 CEACAM6P40199 344 aa13.19□□□□□ -0.3
LTBR-206ENST00000536876 RPEL1Q2QD12 228 aa13.19□□□□□ -0.3
LTBR-206ENST00000536876 TTC23Q5W5X9 447 aa13.19□□□□□ -0.3
LTBR-206ENST00000536876 LAX1Q8IWV1 398 aa13.19□□□□□ -0.3
LTBR-206ENST00000536876 ADAD2Q8NCV1 583 aaKnown RBP13.19□□□□□ -0.3
LTBR-206ENST00000536876 THRSPQ92748 146 aa13.19□□□□□ -0.3
LTBR-206ENST00000536876 ZNF230Q9UIE0 474 aaPredicted RBP13.19□□□□□ -0.3
LTBR-206ENST00000536876 AK3Q9UIJ7 227 aa13.19□□□□□ -0.3
LTBR-206ENST00000536876 SRRM4A7MD48 611 aaKnown RBP13.18□□□□□ -0.3
LTBR-206ENST00000536876 FOXI3A8MTJ6 420 aaPredicted RBP13.18□□□□□ -0.3
LTBR-206ENST00000536876 TMEM14DPA8MWL7 114 aa13.18□□□□□ -0.3
LTBR-206ENST00000536876 TPPPO94811 219 aa13.18□□□□□ -0.3
LTBR-206ENST00000536876 UBBP0CG47 229 aa13.18□□□□□ -0.3
LTBR-206ENST00000536876 CELP19835 753 aa13.18□□□□□ -0.3
LTBR-206ENST00000536876 MAPK3P27361 379 aaPredicted RBP13.18□□□□□ -0.3
LTBR-206ENST00000536876 EWSR1Q01844 656 aaKnown RBP eCLIP13.18□□□□□ -0.3
LTBR-206ENST00000536876 ZNF45Q02386 682 aa13.18□□□□□ -0.3
LTBR-206ENST00000536876 TATDN3Q17R31 274 aa13.18□□□□□ -0.3
LTBR-206ENST00000536876 C1orf100Q5SVJ3 147 aa13.18□□□□□ -0.3
LTBR-206ENST00000536876 EDARADDQ8WWZ3 215 aa13.18□□□□□ -0.3
LTBR-206ENST00000536876 ZC4H2Q9NQZ6 224 aa13.18□□□□□ -0.3
LTBR-206ENST00000536876 SLC35D1Q9NTN3 355 aa13.18□□□□□ -0.3
LTBR-206ENST00000536876 COA4Q9NYJ1 87 aa13.18□□□□□ -0.3
LTBR-206ENST00000536876 KIAA1109Q2LD37 5005 aa13.17□□□□□ -0.3
LTBR-206ENST00000536876 EFCAB10A6NFE3 127 aa13.17□□□□□ -0.3
LTBR-206ENST00000536876 M0R1X1 148 aa13.17□□□□□ -0.3
LTBR-206ENST00000536876 MYL12BO14950 172 aa13.17□□□□□ -0.3
LTBR-206ENST00000536876 CNIH1O95406 144 aa13.17□□□□□ -0.3
LTBR-206ENST00000536876 APOA2P02652 100 aa13.17□□□□□ -0.3
LTBR-206ENST00000536876 CD1AP06126 327 aa13.17□□□□□ -0.3
LTBR-206ENST00000536876 ZBTB25P24278 435 aa13.17□□□□□ -0.3
LTBR-206ENST00000536876 USMG5Q96IX5 58 aa13.17□□□□□ -0.3
LTBR-206ENST00000536876 LPAR5Q9H1C0 372 aa13.17□□□□□ -0.3
LTBR-206ENST00000536876 Q9N2K0 584 aa13.17□□□□□ -0.3
LTBR-206ENST00000536876 AKIP1Q9NQ31 210 aa13.17□□□□□ -0.3
LTBR-206ENST00000536876 DMRT1Q9Y5R6 373 aa13.17□□□□□ -0.3
LTBR-206ENST00000536876 SOCS1O15524 211 aa13.16□□□□□ -0.3
LTBR-206ENST00000536876 PRH1P02810 166 aa13.16□□□□□ -0.3
LTBR-206ENST00000536876 GNAO1P09471 354 aa13.16□□□□□ -0.3
LTBR-206ENST00000536876 WNT4P56705 351 aa13.16□□□□□ -0.3
LTBR-206ENST00000536876 EXOSC2Q13868 293 aaKnown RBP13.16□□□□□ -0.3
LTBR-206ENST00000536876 DEFB114Q30KQ6 69 aa13.16□□□□□ -0.3
LTBR-206ENST00000536876 LAIR2Q6ISS4 152 aa13.16□□□□□ -0.3
LTBR-206ENST00000536876 AHSA2Q719I0 299 aa13.16□□□□□ -0.3
LTBR-206ENST00000536876 DHRSXQ8N5I4 330 aa13.16□□□□□ -0.3
LTBR-206ENST00000536876 TMEM68Q96MH6 324 aa13.16□□□□□ -0.3
LTBR-206ENST00000536876 VPS13DQ5THJ4 4388 aa13.16□□□□□ -0.3
LTBR-206ENST00000536876 OR11H12B2RN74 326 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 LY6G6CO95867 125 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 CD37P11049 281 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 LGALS7P47929 136 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 PACRGLQ8N7B6 248 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 KCNG3Q8TAE7 436 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 SNAPC3Q92966 411 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 WDR89Q96FK6 387 aaPredicted RBP13.15□□□□□ -0.3
LTBR-206ENST00000536876 HARBI1Q96MB7 349 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 OVOL2Q9BRP0 275 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 RIMS4Q9H426 269 aaPredicted RBP13.15□□□□□ -0.3
LTBR-206ENST00000536876 PLEKHJ1Q9NW61 149 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 SLC2A8Q9NY64 477 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 RDH8Q9NYR8 311 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 PEMTQ9UBM1 199 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 PSORS1C1Q9UIG5 152 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 ZNF221Q9UK13 617 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 SELENOKQ9Y6D0 94 aa13.15□□□□□ -0.3
LTBR-206ENST00000536876 TRBV9A0A0B4J1U6 114 aa13.14□□□□□ -0.31
LTBR-206ENST00000536876 AIREO43918 545 aa13.14□□□□□ -0.31
LTBR-206ENST00000536876 OR9G9P0C7N8 305 aa13.14□□□□□ -0.31
LTBR-206ENST00000536876 RHOGP84095 191 aa13.14□□□□□ -0.31
LTBR-206ENST00000536876 TMEM177Q53S58 311 aa13.14□□□□□ -0.31
LTBR-206ENST00000536876 GLT8D1Q68CQ7 371 aa13.14□□□□□ -0.31
LTBR-206ENST00000536876 C8orf59Q8N0T1 100 aaPredicted RBP13.14□□□□□ -0.31
LTBR-206ENST00000536876 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.14□□□□□ -0.31
LTBR-206ENST00000536876 GFI1Q99684 422 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms