RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 C17orf98A8MV24 154 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 MT-CO3P00414 261 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 GCGP01275 180 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 GRPP07492 148 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 SLC25A6P12236 298 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 DNLZQ5SXM8 178 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 Q6P435 159 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 ZNF705AQ6ZN79 300 aaPredicted RBP11.27□□□□□ -0.61
HDAC4-214ENST00000535493 POM121L2Q96KW2 1035 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 PHF7Q9BWX1 381 aaPredicted RBP11.27□□□□□ -0.61
HDAC4-214ENST00000535493 NPCDR1Q9BY65 106 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 LIN7CQ9NUP9 197 aaKnown RBP11.27□□□□□ -0.61
HDAC4-214ENST00000535493 IL17BQ9UHF5 180 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.26□□□□□ -0.61
HDAC4-214ENST00000535493 RBFOX2O43251 390 aaKnown RBP eCLIP11.26□□□□□ -0.614e-6■■□□□ 12.4
HDAC4-214ENST00000535493 ZNF25P17030 456 aaPredicted RBP11.26□□□□□ -0.61
HDAC4-214ENST00000535493 HOXA6P31267 233 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 GFRA1P56159 465 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 GNB1P62873 340 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 GNG3P63215 75 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 GBGT1Q8N5D6 347 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 AGMATQ9BSE5 352 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 PSPNO60542 156 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 OR3A1P47881 315 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 BRWD1-AS2P59051 145 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 BATFQ16520 125 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 COA6Q5JTJ3 125 aaKnown RBP11.26□□□□□ -0.61
HDAC4-214ENST00000535493 DBX2Q6ZNG2 339 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 NUFIP2Q7Z417 695 aaKnown RBP11.26□□□□□ -0.61
HDAC4-214ENST00000535493 LINC01551Q86U37 167 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 ZNF573Q86YE8 665 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 TGIF2LYQ8IUE0 185 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 SAXO1Q8IYX7 474 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 NEIL1Q96FI4 390 aaPredicted RBP11.26□□□□□ -0.61
HDAC4-214ENST00000535493 PCED1AQ9H1Q7 454 aa11.26□□□□□ -0.61
HDAC4-214ENST00000535493 RIMS4Q9H426 269 aaPredicted RBP11.26□□□□□ -0.61
HDAC4-214ENST00000535493 TMEM250H0YL14 139 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 WNT9BO14905 357 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 DNPH1O43598 174 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 CELA3BP08861 270 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 MAGEA5P43359 124 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 CXCL12P48061 93 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 CYB561P49447 251 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 AESQ08117 197 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 LYSMD4Q5XG99 296 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 ZNF826PQ6ZT77 177 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 OR10P1Q8NGE3 313 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 SGMS2Q8NHU3 365 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 DTD1Q8TEA8 209 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 FAM234AQ9H0X4 552 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 TRBV20OR9-2A0A075B6H5 130 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 K7ESF4 209 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 NXPH2O95156 264 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 PDLIM4P50479 330 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 IL11RAQ14626 422 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 IQCJQ1A5X6 159 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 PPP1R32Q7Z5V6 425 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 ACY3Q96HD9 319 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 MS4A10Q96PG2 267 aa11.25□□□□□ -0.61
HDAC4-214ENST00000535493 GGCTO75223 188 aaKnown RBP11.24□□□□□ -0.61
HDAC4-214ENST00000535493 COX5AP20674 150 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 CENPVQ7Z7K6 275 aaPredicted RBP11.24□□□□□ -0.61
HDAC4-214ENST00000535493 SPEM1Q8N4L4 309 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 ZNF709Q8N972 641 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 SCCPDHQ8NBX0 429 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 TBX15Q96SF7 602 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 MANBALQ9NQG1 85 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 CADP27708 2225 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 LRRC30A6NM36 301 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 PMS2P5A8MQ11 134 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 F2Z2F3 143 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 COX5BP10606 129 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 CBLN1P23435 193 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 ADMP35318 185 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 PLP2Q04941 152 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 ZNF497Q6ZNH5 498 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 VKORC1L1Q8N0U8 176 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 UBE2ZQ9H832 354 aaPredicted RBP11.24□□□□□ -0.61
HDAC4-214ENST00000535493 MRPS17Q9Y2R5 130 aaKnown RBP11.24□□□□□ -0.61
HDAC4-214ENST00000535493 DMXL1Q9Y485 3027 aa11.24□□□□□ -0.61
HDAC4-214ENST00000535493 ATMQ13315 3056 aa11.23□□□□□ -0.61
HDAC4-214ENST00000535493 SLC17A3O00476 420 aa11.23□□□□□ -0.61
HDAC4-214ENST00000535493 SPINK4O60575 86 aa11.23□□□□□ -0.61
HDAC4-214ENST00000535493 CDC34P49427 236 aaPredicted RBP11.23□□□□□ -0.61
HDAC4-214ENST00000535493 BEND2Q8NDZ0 799 aa11.23□□□□□ -0.61
HDAC4-214ENST00000535493 TMEM147Q9BVK8 224 aa11.23□□□□□ -0.61
HDAC4-214ENST00000535493 OR2J1Q9GZK6 312 aa11.23□□□□□ -0.61
HDAC4-214ENST00000535493 HSPB7Q9UBY9 170 aa11.23□□□□□ -0.61
HDAC4-214ENST00000535493 KALRNO60229 2985 aa11.23□□□□□ -0.61
HDAC4-214ENST00000535493 TOMM20LQ6UXN7 152 aa11.23□□□□□ -0.61
HDAC4-214ENST00000535493 MRGPRDQ8TDS7 321 aa11.23□□□□□ -0.61
HDAC4-214ENST00000535493 DCTN5Q9BTE1 182 aa11.23□□□□□ -0.61
HDAC4-214ENST00000535493 NAGKQ9UJ70 344 aa11.23□□□□□ -0.61
HDAC4-214ENST00000535493 PAM16Q9Y3D7 125 aa11.23□□□□□ -0.61
HDAC4-214ENST00000535493 LRP5LA4QPB2 252 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 LINC00473A8K010 186 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 SSTR5P35346 364 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 CDKN1AP38936 164 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 LHX2P50458 406 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 ERVFC1-1P60608 527 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms