RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 FGFRL1Q8N441 504 aa15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 TMEM186Q96B77 213 aa15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 GALNT14Q96FL9 552 aa15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 QTRT1Q9BXR0 403 aaKnown RBP15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 TUBD1Q9UJT1 453 aa15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 IGLV1-36A0A0B4J1U3 117 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 EPOPA6NHQ4 379 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 GCGP01275 180 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 COX6CP09669 75 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 COX5BP10606 129 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 RIPPLY2Q5TAB7 128 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 MIC13Q5XKP0 118 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 LSM10Q969L4 123 aaKnown RBP15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 FOXD3Q9UJU5 478 aaPredicted RBP15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 TRBV5-5A0A0J9YX44 114 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 ZNF729A6NN14 1252 aaPredicted RBP15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 CFDP00746 253 aaPredicted RBP15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 GPX1P07203 203 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 RPS20P60866 119 aaKnown RBP15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 HSPE1P61604 102 aaKnown RBP15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 PCOLCEQ15113 449 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 LINC01560Q8TB33 94 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 RALYQ9UKM9 306 aaKnown RBP15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 A0A1W2PQM1 296 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 FAM3BP58499 235 aaPredicted RBP15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 C2orf83Q53S99 150 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 AMELYQ99218 206 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 A0A0B4J293 547 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 LOC101059948A0A1B0GTJ6 334 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 ISG15P05161 165 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 CD81P60033 236 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 PQLC2Q6ZP29 291 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 LEAP2Q969E1 77 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 TXNDC17Q9BRA2 123 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 TMEM238LA0A1B0GVL6 79 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 A6NJY4 79 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 NUDT3O95989 172 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 PAM16Q9Y3D7 125 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 LHFPL6Q9Y693 200 aa15.6■□□□□ 0.09
SFSWAP-203ENST00000535236 H7C2G1 150 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 M0QZK8 103 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 GGCTO75223 188 aaKnown RBP15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 ZNF79Q15937 498 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 SAXO1Q8IYX7 474 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 OR4C13Q8NGP0 309 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 POM121Q96HA1 1249 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 TIMP4Q99727 224 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 FOXJ2Q9P0K8 574 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 NPIPB11E5RHQ5 1161 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 NPPCP23582 126 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 TMEM30BQ3MIR4 351 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 CYB561D1Q8N8Q1 229 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 RGPD4Q7Z3J3 1758 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 CA2P00918 260 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 REG1AP05451 166 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 ACAA1P09110 424 aaPredicted RBP15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 SNRPD3P62318 126 aaKnown RBP15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 SMDT1Q9H4I9 107 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 OR5AC2Q9NZP5 309 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 COL18A1P39060 1754 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 FAM181AQ8N9Y4 354 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 DNAJC4Q9NNZ3 241 aa15.59■□□□□ 0.09
SFSWAP-203ENST00000535236 FCARP24071 287 aa15.58■□□□□ 0.09
SFSWAP-203ENST00000535236 GPR146Q96CH1 333 aa15.58■□□□□ 0.09
SFSWAP-203ENST00000535236 RAXQ9Y2V3 346 aa15.58■□□□□ 0.09
SFSWAP-203ENST00000535236 FXYD3Q14802 87 aa15.58■□□□□ 0.08
SFSWAP-203ENST00000535236 CHRNA10Q9GZZ6 450 aa15.58■□□□□ 0.08
SFSWAP-203ENST00000535236 MT-ND6P03923 174 aa15.58■□□□□ 0.08
SFSWAP-203ENST00000535236 TMEM74BQ9NUR3 256 aa15.58■□□□□ 0.08
SFSWAP-203ENST00000535236 VSIG10L2P0DP72 767 aa15.58■□□□□ 0.08
SFSWAP-203ENST00000535236 PTGDSP41222 190 aa15.58■□□□□ 0.08
SFSWAP-203ENST00000535236 SCN3AQ9NY46 2000 aa15.58■□□□□ 0.08
SFSWAP-203ENST00000535236 UBE2V2Q15819 145 aa15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 LOC102724200A0A096LPH7 203 aaPredicted RBP15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 C17orf51A8MQB3 221 aa15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 LMX1BO60663 402 aa15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 SELENOHQ8IZQ5 122 aaKnown RBP15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 TAF15Q92804 592 aaKnown RBP eCLIP15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 PGLYRP4Q96LB8 373 aa15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 MAP1LC3AQ9H492 121 aa15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 DNAJC13O75165 2243 aa15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 RNASE1P07998 156 aaKnown RBP15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 PRDM6Q9NQX0 595 aa15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 GPR132Q9UNW8 380 aa15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 WISP3O95389 354 aaPredicted RBP15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 APOBEC3AP31941 199 aaPredicted RBP15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 WNT5BQ9H1J7 359 aa15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 MARCH11A6NNE9 402 aa15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 UQCRFS1P47985 274 aa15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 FUT5Q11128 374 aa15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 GPR82Q96P67 336 aa15.57■□□□□ 0.08
SFSWAP-203ENST00000535236 FAM90A26D6RGX4 464 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 GLIPR1P48060 266 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 FAM206AQ9NX38 181 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 IGKV3OR2-268A0A0C4DH90 116 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 C1QCP02747 245 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 ZNF25P17030 456 aaPredicted RBP15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 DLX6P56179 175 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 TMEM177Q53S58 311 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 TMEM45BQ96B21 275 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms